Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA5O15230 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.91■□□□□ 0.78
LAMA5O15230 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LAMA5O15230 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA5O15230 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.91■□□□□ 0.78
LAMA5O15230 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
LAMA5O15230 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LAMA5O15230 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LAMA5O15230 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.91■□□□□ 0.78
LAMA5O15230 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.91■□□□□ 0.78
LAMA5O15230 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.91■□□□□ 0.78
LAMA5O15230 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LAMA5O15230 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LAMA5O15230 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.9■□□□□ 0.78
LAMA5O15230 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.9■□□□□ 0.78
LAMA5O15230 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
LAMA5O15230 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.9■□□□□ 0.78
LAMA5O15230 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.9■□□□□ 0.78
LAMA5O15230 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 AC145676.1-201ENST00000514988 2004 ntBASIC19.9■□□□□ 0.78
LAMA5O15230 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LAMA5O15230 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMA5O15230 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMA5O15230 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMA5O15230 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LAMA5O15230 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA5O15230 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.89■□□□□ 0.77
LAMA5O15230 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA5O15230 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMA5O15230 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.89■□□□□ 0.77
LAMA5O15230 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.89■□□□□ 0.77
LAMA5O15230 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMA5O15230 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMA5O15230 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.88■□□□□ 0.77
LAMA5O15230 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMA5O15230 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.88■□□□□ 0.77
LAMA5O15230 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMA5O15230 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.88■□□□□ 0.77
LAMA5O15230 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.88■□□□□ 0.77
LAMA5O15230 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.88■□□□□ 0.77
LAMA5O15230 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.88■□□□□ 0.77
LAMA5O15230 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMA5O15230 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMA5O15230 EEF1DP3-203ENST00000566025 782 ntBASIC19.88■□□□□ 0.77
LAMA5O15230 AC133561.5-201ENST00000635547 218 ntBASIC19.88■□□□□ 0.77
LAMA5O15230 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LAMA5O15230 KRT17P1-201ENST00000399211 1546 ntBASIC19.88■□□□□ 0.77
LAMA5O15230 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMA5O15230 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.87■□□□□ 0.77
LAMA5O15230 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMA5O15230 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMA5O15230 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMA5O15230 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMA5O15230 AC233702.5-201ENST00000584107 538 ntBASIC19.87■□□□□ 0.77
LAMA5O15230 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
LAMA5O15230 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 AC069236.1-201ENST00000604339 616 ntBASIC19.87■□□□□ 0.77
LAMA5O15230 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LAMA5O15230 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMA5O15230 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMA5O15230 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LAMA5O15230 TMPOP1-202ENST00000424642 1267 ntBASIC19.86■□□□□ 0.77
LAMA5O15230 TSPY7P-201ENST00000431358 1114 ntBASIC19.86■□□□□ 0.77
LAMA5O15230 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
LAMA5O15230 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LAMA5O15230 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LAMA5O15230 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LAMA5O15230 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.86■□□□□ 0.77
LAMA5O15230 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms