Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv3-4A0A140T8Q4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Igkv3-4A0A140T8Q4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv3-4A0A140T8Q4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv3-4A0A140T8Q4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Igkv3-4A0A140T8Q4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Mir6236-201ENSMUST00000184437 123 ntBASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv3-4A0A140T8Q4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv3-4A0A140T8Q4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv3-4A0A140T8Q4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm45141-201ENSMUST00000206502 1888 ntBASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv3-4A0A140T8Q4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.66□□□□□ -0.54
Igkv3-4A0A140T8Q4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv3-4A0A140T8Q4 Gm44832-201ENSMUST00000208849 2303 ntBASIC11.66□□□□□ -0.54
Igkv3-4A0A140T8Q4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms