Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Gm10812-201ENSMUST00000099864 546 ntBASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpl13a-ps1A0A140T8K2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm7860-201ENSMUST00000121190 879 ntBASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Gm26524-201ENSMUST00000192339 390 ntBASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpl13a-ps1A0A140T8K2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms