Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5493S4R2D1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5493S4R2D1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5493S4R2D1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Gm11175-201ENSMUST00000116172 543 ntBASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Gm43530-201ENSMUST00000195920 274 ntBASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Gm5493S4R2D1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm5493S4R2D1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Gm5493S4R2D1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.86■□□□□ 0.13
Gm5493S4R2D1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms