Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v1c1Q9Z1G3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v1c1Q9Z1G3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v1c1Q9Z1G3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Atp6v1c1Q9Z1G3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v1c1Q9Z1G3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6v1c1Q9Z1G3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6v1c1Q9Z1G3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6v1c1Q9Z1G3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.27■□□□□ 0.52
Atp6v1c1Q9Z1G3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Atp6v1c1Q9Z1G3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp6v1c1Q9Z1G3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp6v1c1Q9Z1G3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Atp6v1c1Q9Z1G3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6v1c1Q9Z1G3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms