Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 GABARAPL3-202ENST00000624044 1851 ntBASIC20.07■□□□□ 0.8
AP4S1Q9Y587 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4S1Q9Y587 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4S1Q9Y587 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4S1Q9Y587 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4S1Q9Y587 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP4S1Q9Y587 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 KRT18P60-201ENST00000312876 1297 ntBASIC20.05■□□□□ 0.8
AP4S1Q9Y587 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4S1Q9Y587 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
AP4S1Q9Y587 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.03■□□□□ 0.8
AP4S1Q9Y587 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4S1Q9Y587 AP005212.1-201ENST00000581547 1997 ntBASIC20.03■□□□□ 0.8
AP4S1Q9Y587 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 AC079089.2-201ENST00000531211 1277 ntBASIC20.02■□□□□ 0.8
AP4S1Q9Y587 DUX4L18-201ENST00000553347 1267 ntBASIC20.02■□□□□ 0.8
AP4S1Q9Y587 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.02■□□□□ 0.8
AP4S1Q9Y587 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP4S1Q9Y587 AL391422.3-201ENST00000603791 2761 ntBASIC20.01■□□□□ 0.79
AP4S1Q9Y587 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms