Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps35Q9EQH3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Vps35Q9EQH3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps35Q9EQH3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps35Q9EQH3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps35Q9EQH3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps35Q9EQH3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps35Q9EQH3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.65■□□□□ 0.58
Vps35Q9EQH3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vps35Q9EQH3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms