Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PTCD2Q8WV60 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
PTCD2Q8WV60 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 AL162430.1-201ENST00000480705 870 ntBASIC21.53■■□□□ 1.04
PTCD2Q8WV60 AL354811.1-201ENST00000610286 706 ntBASIC21.53■■□□□ 1.04
PTCD2Q8WV60 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 AC026471.6-201ENST00000622954 1905 ntBASIC21.53■■□□□ 1.04
PTCD2Q8WV60 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PTCD2Q8WV60 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD2Q8WV60 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PTCD2Q8WV60 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PTCD2Q8WV60 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.52■■□□□ 1.03
PTCD2Q8WV60 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.52■■□□□ 1.03
PTCD2Q8WV60 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L2-201ENST00000561772 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L6-201ENST00000626483 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L1-201ENST00000627662 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L8-201ENST00000629013 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L3-201ENST00000630187 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L7-201ENST00000630678 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 DUX4L5-201ENST00000630834 1275 ntBASIC21.51■■□□□ 1.03
PTCD2Q8WV60 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD2Q8WV60 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 AC026310.3-201ENST00000625186 2373 ntBASIC21.5■■□□□ 1.03
PTCD2Q8WV60 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 SMUG1P1-201ENST00000590640 811 ntBASIC21.5■■□□□ 1.03
PTCD2Q8WV60 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD2Q8WV60 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.49■■□□□ 1.03
PTCD2Q8WV60 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCD2Q8WV60 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 CCDC92B-201ENST00000575506 885 ntBASIC21.48■■□□□ 1.03
PTCD2Q8WV60 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTCD2Q8WV60 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 Z98882.1-201ENST00000622160 2253 ntBASIC21.47■■□□□ 1.03
PTCD2Q8WV60 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms