Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp40Q8R1F9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpp40Q8R1F9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp40Q8R1F9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp40Q8R1F9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpp40Q8R1F9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rpp40Q8R1F9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpp40Q8R1F9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
Rpp40Q8R1F9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp40Q8R1F9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp40Q8R1F9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpp40Q8R1F9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms