Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shisa4Q8CA71 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Shisa4Q8CA71 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Shisa4Q8CA71 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Gm6365-201ENSMUST00000054711 744 ntBASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shisa4Q8CA71 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shisa4Q8CA71 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shisa4Q8CA71 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shisa4Q8CA71 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.91■■□□□ 1.1
Shisa4Q8CA71 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shisa4Q8CA71 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Shisa4Q8CA71 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa4Q8CA71 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms