Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin9Q8C735 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin9Q8C735 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.44■□□□□ 0.86
Lin9Q8C735 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin9Q8C735 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
Lin9Q8C735 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.43■□□□□ 0.86
Lin9Q8C735 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lin9Q8C735 Gm27011-201ENSMUST00000182352 972 ntBASIC20.43■□□□□ 0.86
Lin9Q8C735 Gm7514-201ENSMUST00000209475 934 ntBASIC20.43■□□□□ 0.86
Lin9Q8C735 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.43■□□□□ 0.86
Lin9Q8C735 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lin9Q8C735 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin9Q8C735 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.42■□□□□ 0.86
Lin9Q8C735 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lin9Q8C735 Gm7860-201ENSMUST00000121190 879 ntBASIC20.42■□□□□ 0.86
Lin9Q8C735 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Lin9Q8C735 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin9Q8C735 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lin9Q8C735 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lin9Q8C735 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.41■□□□□ 0.86
Lin9Q8C735 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.41■□□□□ 0.86
Lin9Q8C735 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.41■□□□□ 0.86
Lin9Q8C735 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lin9Q8C735 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lin9Q8C735 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Lin9Q8C735 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.4■□□□□ 0.86
Lin9Q8C735 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.4■□□□□ 0.86
Lin9Q8C735 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lin9Q8C735 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Lin9Q8C735 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin9Q8C735 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Lin9Q8C735 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lin9Q8C735 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lin9Q8C735 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Lin9Q8C735 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Lin9Q8C735 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Lin9Q8C735 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Lin9Q8C735 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.39■□□□□ 0.85
Lin9Q8C735 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Lin9Q8C735 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Lin9Q8C735 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin9Q8C735 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.38■□□□□ 0.85
Lin9Q8C735 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lin9Q8C735 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.38■□□□□ 0.85
Lin9Q8C735 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin9Q8C735 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin9Q8C735 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lin9Q8C735 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.37■□□□□ 0.85
Lin9Q8C735 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.37■□□□□ 0.85
Lin9Q8C735 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms