Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.8■□□□□ 0.44
Eri3Q8C460 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Eri3Q8C460 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Eri3Q8C460 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Eri3Q8C460 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 AV356131-201ENSMUST00000206201 750 ntBASIC17.79■□□□□ 0.44
Eri3Q8C460 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.79■□□□□ 0.44
Eri3Q8C460 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Eri3Q8C460 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Eri3Q8C460 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Eri3Q8C460 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Eri3Q8C460 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eri3Q8C460 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eri3Q8C460 Gm13534-201ENSMUST00000121169 513 ntBASIC17.78■□□□□ 0.44
Eri3Q8C460 Gm26571-201ENSMUST00000181399 666 ntBASIC17.78■□□□□ 0.44
Eri3Q8C460 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.78■□□□□ 0.44
Eri3Q8C460 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Eri3Q8C460 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eri3Q8C460 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Eri3Q8C460 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Eri3Q8C460 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Eri3Q8C460 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Gm42569-201ENSMUST00000200539 472 ntBASIC17.77■□□□□ 0.44
Eri3Q8C460 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.77■□□□□ 0.44
Eri3Q8C460 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Eri3Q8C460 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Eri3Q8C460 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.77■□□□□ 0.43
Eri3Q8C460 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Eri3Q8C460 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Eri3Q8C460 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Eri3Q8C460 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Eri3Q8C460 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Eri3Q8C460 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.76■□□□□ 0.43
Eri3Q8C460 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Eri3Q8C460 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Eri3Q8C460 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Eri3Q8C460 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Eri3Q8C460 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.76■□□□□ 0.43
Eri3Q8C460 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.76■□□□□ 0.43
Eri3Q8C460 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.75■□□□□ 0.43
Eri3Q8C460 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Eri3Q8C460 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.75■□□□□ 0.43
Eri3Q8C460 Gm7514-201ENSMUST00000209475 934 ntBASIC17.75■□□□□ 0.43
Eri3Q8C460 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Eri3Q8C460 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Eri3Q8C460 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Eri3Q8C460 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.75■□□□□ 0.43
Eri3Q8C460 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Eri3Q8C460 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Eri3Q8C460 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Eri3Q8C460 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms