Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
UBE3BQ7Z3V4 AC003102.1-202ENST00000563394 1796 ntBASIC26.66■■□□□ 1.86
UBE3BQ7Z3V4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 MIR663A-201ENST00000385250 93 ntBASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE3BQ7Z3V4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 AC006970.2-201ENST00000450065 779 ntBASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 KRT18P20-201ENST00000548986 1279 ntBASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 SLC7A5P2-201ENST00000553010 536 ntBASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.64■■□□□ 1.86
UBE3BQ7Z3V4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
UBE3BQ7Z3V4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.64■■□□□ 1.85
UBE3BQ7Z3V4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
UBE3BQ7Z3V4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
UBE3BQ7Z3V4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
UBE3BQ7Z3V4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 AL050303.2-201ENST00000619798 666 ntBASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
UBE3BQ7Z3V4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 AC010536.3-201ENST00000620306 533 ntBASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.59■■□□□ 1.85
UBE3BQ7Z3V4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
UBE3BQ7Z3V4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms