Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DEPDC1Q5TB30 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 TSPY26P-201ENST00000476365 1326 ntBASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 SMUG1P1-201ENST00000590640 811 ntBASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
DEPDC1Q5TB30 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 AL034346.1-201ENST00000568244 1277 ntBASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1Q5TB30 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 AC005837.3-201ENST00000612163 286 ntBASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1Q5TB30 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.52■□□□□ 0.87
DEPDC1Q5TB30 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.52■□□□□ 0.87
DEPDC1Q5TB30 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DEPDC1Q5TB30 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 AP004607.7-201ENST00000527152 1677 ntBASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 AC142381.2-201ENST00000566120 298 ntBASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1Q5TB30 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1Q5TB30 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 AC010542.4-201ENST00000563151 1910 ntBASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 FBXW4P1-201ENST00000426721 2239 ntBASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms