Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1d1Q3UV55 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1d1Q3UV55 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1d1Q3UV55 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nr1d1Q3UV55 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.74■□□□□ 0.75
Nr1d1Q3UV55 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
Nr1d1Q3UV55 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nr1d1Q3UV55 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Gm43530-201ENSMUST00000195920 274 ntBASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nr1d1Q3UV55 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1d1Q3UV55 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr1d1Q3UV55 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1d1Q3UV55 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nr1d1Q3UV55 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Gm8493-201ENSMUST00000196881 489 ntBASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr1d1Q3UV55 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms