Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 CUP1-1YHR053C 186 nt3.31□□□□□ -1.88
RUP1Q12242 CUP1-2YHR055C 186 nt3.31□□□□□ -1.88
RUP1Q12242 YIL161WYIL161W 708 nt3.31□□□□□ -1.88
RUP1Q12242 YVH1YIR026C 1095 nt3.31□□□□□ -1.88
RUP1Q12242 YLR285C-AYLR285C-A 171 nt3.31□□□□□ -1.88
RUP1Q12242 YPL088WYPL088W 1029 nt3.31□□□□□ -1.88
RUP1Q12242 ERV15YBR210W 429 nt3.31□□□□□ -1.88
RUP1Q12242 TMA108YIL137C 2841 nt3.31□□□□□ -1.88
RUP1Q12242 HUL5YGL141W 2733 nt3.31□□□□□ -1.88
RUP1Q12242 EXO70YJL085W 1872 nt3.3□□□□□ -1.88
RUP1Q12242 PEX1YKL197C 3132 nt3.3□□□□□ -1.88
RUP1Q12242 YLR177WYLR177W 1887 nt3.3□□□□□ -1.88
RUP1Q12242 PMT6YGR199W 2280 nt3.3□□□□□ -1.88
RUP1Q12242 LSM4YER112W 564 nt3.3□□□□□ -1.88
RUP1Q12242 TDA10YGR205W 873 nt3.3□□□□□ -1.88
RUP1Q12242 POL32YJR043C 1053 nt3.3□□□□□ -1.88
RUP1Q12242 AIM26YKL037W 357 nt3.3□□□□□ -1.88
RUP1Q12242 CMC1YKL137W 336 nt3.3□□□□□ -1.88
RUP1Q12242 BUR2YLR226W 1188 nt3.3□□□□□ -1.88
RUP1Q12242 FMP41YNL168C 780 nt3.3□□□□□ -1.88
RUP1Q12242 FIG1YBR040W 897 nt3.3□□□□□ -1.88
RUP1Q12242 PRM4YPL156C 855 nt3.3□□□□□ -1.88
RUP1Q12242 CSR2YPR030W 3366 nt3.29□□□□□ -1.88
RUP1Q12242 TFB2YPL122C 1542 nt3.29□□□□□ -1.88
RUP1Q12242 PKP2YGL059W 1476 nt3.29□□□□□ -1.88
RUP1Q12242 CIN8YEL061C 3003 nt3.29□□□□□ -1.88
RUP1Q12242 YGR270C-AYGR270C-A 219 nt3.29□□□□□ -1.88
RUP1Q12242 PSF2YJL072C 642 nt3.29□□□□□ -1.88
RUP1Q12242 PBA1YLR199C 831 nt3.29□□□□□ -1.88
RUP1Q12242 ERV41YML067C 1059 nt3.29□□□□□ -1.88
RUP1Q12242 ECM13YBL043W 774 nt3.29□□□□□ -1.88
RUP1Q12242 RPS7AYOR096W 573 nt3.29□□□□□ -1.88
RUP1Q12242 MSM1YGR171C 1728 nt3.29□□□□□ -1.88
RUP1Q12242 LRG1YDL240W 3054 nt3.29□□□□□ -1.88
RUP1Q12242 FKH2YNL068C 2589 nt3.29□□□□□ -1.88
RUP1Q12242 STP1YDR463W 1560 nt3.29□□□□□ -1.88
RUP1Q12242 RSC1YGR056W 2787 nt3.29□□□□□ -1.88
RUP1Q12242 RAD2YGR258C 3096 nt3.28□□□□□ -1.88
RUP1Q12242 TDA1YMR291W 1761 nt3.28□□□□□ -1.88
RUP1Q12242 YDL199CYDL199C 2064 nt3.28□□□□□ -1.88
RUP1Q12242 RPN2YIL075C 2838 nt3.28□□□□□ -1.88
RUP1Q12242 YAK1YJL141C 2424 nt3.28□□□□□ -1.88
RUP1Q12242 LRS4YDR439W 1044 nt3.28□□□□□ -1.88
RUP1Q12242 YER039C-AYER039C-A 219 nt3.28□□□□□ -1.88
RUP1Q12242 MEI4YER044C-A 1227 nt3.28□□□□□ -1.88
RUP1Q12242 YGR111WYGR111W 1203 nt3.28□□□□□ -1.88
RUP1Q12242 YGR126WYGR126W 693 nt3.28□□□□□ -1.88
RUP1Q12242 YHR097CYHR097C 1101 nt3.28□□□□□ -1.88
RUP1Q12242 SNX4YJL036W 1272 nt3.28□□□□□ -1.88
RUP1Q12242 RLP7YNL002C 969 nt3.28□□□□□ -1.88
RUP1Q12242 APA1YCL050C 966 nt3.28□□□□□ -1.88
RUP1Q12242 SPH1YLR313C 1593 nt3.28□□□□□ -1.88
RUP1Q12242 ETP1YHL010C 1758 nt3.28□□□□□ -1.89
RUP1Q12242 ARP9YMR033W 1404 nt3.27□□□□□ -1.89
RUP1Q12242 SNQ2YDR011W 4506 nt3.27□□□□□ -1.89
RUP1Q12242 HDA2YDR295C 2025 nt3.27□□□□□ -1.89
RUP1Q12242 ATG26YLR189C 3597 nt3.27□□□□□ -1.89
RUP1Q12242 AI4Q0065 1671 nt3.27□□□□□ -1.89
RUP1Q12242 RRP17YDR412W 708 nt3.27□□□□□ -1.89
RUP1Q12242 RPL30YGL030W 318 nt3.27□□□□□ -1.89
RUP1Q12242 tR(UCU)Q1tR(UCU)Q1 73 nt3.27□□□□□ -1.89
RUP1Q12242 ERP1YAR002C-A 660 nt3.27□□□□□ -1.89
RUP1Q12242 RDN58-1RDN58-1 158 nt3.27□□□□□ -1.89
RUP1Q12242 RDN58-2RDN58-2 158 nt3.27□□□□□ -1.89
RUP1Q12242 SAM37YMR060C 984 nt3.27□□□□□ -1.89
RUP1Q12242 DIA1YMR316W 1011 nt3.27□□□□□ -1.89
RUP1Q12242 RFC3YNL290W 1023 nt3.27□□□□□ -1.89
RUP1Q12242 YNL320WYNL320W 855 nt3.27□□□□□ -1.89
RUP1Q12242 DCP1YOL149W 696 nt3.27□□□□□ -1.89
RUP1Q12242 SEA4YBL104C 3117 nt3.27□□□□□ -1.89
RUP1Q12242 ALG8YOR067C 1734 nt3.27□□□□□ -1.89
RUP1Q12242 FRE4YNR060W 2160 nt3.27□□□□□ -1.89
RUP1Q12242 ECM18YDR125C 1362 nt3.26□□□□□ -1.89
RUP1Q12242 VPS33YLR396C 2076 nt3.26□□□□□ -1.89
RUP1Q12242 APA2YDR530C 978 nt3.26□□□□□ -1.89
RUP1Q12242 GEP7YGL057C 864 nt3.26□□□□□ -1.89
RUP1Q12242 DOG1YHR044C 741 nt3.26□□□□□ -1.89
RUP1Q12242 COQ9YLR201C 783 nt3.26□□□□□ -1.89
RUP1Q12242 YHR080CYHR080C 4038 nt3.26□□□□□ -1.89
RUP1Q12242 RIF1YBR275C 5751 nt3.26□□□□□ -1.89
RUP1Q12242 YDL176WYDL176W 2127 nt3.26□□□□□ -1.89
RUP1Q12242 EBS1YDR206W 2655 nt3.26□□□□□ -1.89
RUP1Q12242 REC8YPR007C 2043 nt3.26□□□□□ -1.89
RUP1Q12242 HFD1YMR110C 1599 nt3.25□□□□□ -1.89
RUP1Q12242 YMR018WYMR018W 1545 nt3.25□□□□□ -1.89
RUP1Q12242 AEP2YMR282C 1743 nt3.25□□□□□ -1.89
RUP1Q12242 SLS1YLR139C 1932 nt3.25□□□□□ -1.89
RUP1Q12242 LCB5YLR260W 2064 nt3.25□□□□□ -1.89
RUP1Q12242 YIR021W-AYIR021W-A 213 nt3.25□□□□□ -1.89
RUP1Q12242 GLG2YJL137C 1143 nt3.25□□□□□ -1.89
RUP1Q12242 SWD2YKL018W 990 nt3.25□□□□□ -1.89
RUP1Q12242 ECM4YKR076W 1113 nt3.25□□□□□ -1.89
RUP1Q12242 RPL22AYLR061W 366 nt3.25□□□□□ -1.89
RUP1Q12242 YDR089WYDR089W 2610 nt3.24□□□□□ -1.89
RUP1Q12242 SQS1YNL224C 2304 nt3.24□□□□□ -1.89
RUP1Q12242 SPO14YKR031C 5052 nt3.24□□□□□ -1.89
RUP1Q12242 RPL22BYFL034C-A 369 nt3.24□□□□□ -1.89
RUP1Q12242 RPN1YHR027C 2982 nt3.24□□□□□ -1.89
RUP1Q12242 NEJ1YLR265C 1029 nt3.24□□□□□ -1.89
RUP1Q12242 CSM3YMR048W 954 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms