Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.44■■□□□ 1.98
KCNQ4P56696 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.44■■□□□ 1.98
KCNQ4P56696 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.44■■□□□ 1.98
KCNQ4P56696 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KCNQ4P56696 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KCNQ4P56696 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KCNQ4P56696 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.44■■□□□ 1.98
KCNQ4P56696 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.43■■□□□ 1.98
KCNQ4P56696 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.43■■□□□ 1.98
KCNQ4P56696 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.43■■□□□ 1.98
KCNQ4P56696 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.43■■□□□ 1.98
KCNQ4P56696 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.43■■□□□ 1.98
KCNQ4P56696 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.43■■□□□ 1.98
KCNQ4P56696 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNQ4P56696 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
KCNQ4P56696 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
KCNQ4P56696 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
KCNQ4P56696 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
KCNQ4P56696 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.42■■□□□ 1.98
KCNQ4P56696 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
KCNQ4P56696 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
KCNQ4P56696 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
KCNQ4P56696 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.41■■□□□ 1.98
KCNQ4P56696 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
KCNQ4P56696 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
KCNQ4P56696 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 ECEL1P3-201ENST00000427961 737 ntBASIC27.41■■□□□ 1.98
KCNQ4P56696 AP003097.1-201ENST00000530657 1135 ntBASIC27.41■■□□□ 1.98
KCNQ4P56696 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.41■■□□□ 1.98
KCNQ4P56696 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
KCNQ4P56696 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
KCNQ4P56696 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
KCNQ4P56696 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
KCNQ4P56696 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.4■■□□□ 1.98
KCNQ4P56696 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.4■■□□□ 1.98
KCNQ4P56696 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.4■■□□□ 1.98
KCNQ4P56696 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
KCNQ4P56696 AP006587.3-201ENST00000525742 1516 ntBASIC27.4■■□□□ 1.98
KCNQ4P56696 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
KCNQ4P56696 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
KCNQ4P56696 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
KCNQ4P56696 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.39■■□□□ 1.98
KCNQ4P56696 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.39■■□□□ 1.98
KCNQ4P56696 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.39■■□□□ 1.98
KCNQ4P56696 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.39■■□□□ 1.98
KCNQ4P56696 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.39■■□□□ 1.98
KCNQ4P56696 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
KCNQ4P56696 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.39■■□□□ 1.98
KCNQ4P56696 AL359736.2-201ENST00000621992 437 ntBASIC27.39■■□□□ 1.98
KCNQ4P56696 OR7E47P-201ENST00000546390 1422 ntBASIC27.39■■□□□ 1.97
KCNQ4P56696 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.38■■□□□ 1.97
KCNQ4P56696 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
KCNQ4P56696 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNQ4P56696 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.37■■□□□ 1.97
KCNQ4P56696 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KCNQ4P56696 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KCNQ4P56696 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.37■■□□□ 1.97
KCNQ4P56696 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
KCNQ4P56696 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.37■■□□□ 1.97
KCNQ4P56696 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
KCNQ4P56696 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNQ4P56696 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KCNQ4P56696 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNQ4P56696 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.36■■□□□ 1.97
KCNQ4P56696 AC008403.3-201ENST00000598924 454 ntBASIC27.36■■□□□ 1.97
KCNQ4P56696 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.36■■□□□ 1.97
KCNQ4P56696 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.36■■□□□ 1.97
KCNQ4P56696 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.36■■□□□ 1.97
KCNQ4P56696 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.36■■□□□ 1.97
KCNQ4P56696 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.35■■□□□ 1.97
KCNQ4P56696 RBM17P2-201ENST00000616397 1405 ntBASIC27.35■■□□□ 1.97
KCNQ4P56696 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
KCNQ4P56696 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNQ4P56696 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNQ4P56696 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
KCNQ4P56696 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KCNQ4P56696 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.35■■□□□ 1.97
KCNQ4P56696 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KCNQ4P56696 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KCNQ4P56696 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms