Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 MIX14YDR031W 366 nt3.02□□□□□ -1.93
YNL040WP53960 MRH1YDR033W 963 nt3.02□□□□□ -1.93
YNL040WP53960 RAD55YDR076W 1221 nt3.02□□□□□ -1.93
YNL040WP53960 YDR355CYDR355C 303 nt3.02□□□□□ -1.93
YNL040WP53960 NKP1YDR383C 717 nt3.02□□□□□ -1.93
YNL040WP53960 TAM41YGR046W 1158 nt3.02□□□□□ -1.93
YNL040WP53960 IZH2YOL002C 954 nt3.02□□□□□ -1.93
YNL040WP53960 YOR385WYOR385W 873 nt3.02□□□□□ -1.93
YNL040WP53960 EBS1YDR206W 2655 nt3.02□□□□□ -1.93
YNL040WP53960 FLO1YAR050W 4614 nt3.02□□□□□ -1.93
YNL040WP53960 ALG8YOR067C 1734 nt3.02□□□□□ -1.93
YNL040WP53960 SKP2YNL311C 2292 nt3.02□□□□□ -1.93
YNL040WP53960 ESL1YIL151C 3357 nt3.01□□□□□ -1.93
YNL040WP53960 YIL169CYIL169C 2988 nt3.01□□□□□ -1.93
YNL040WP53960 STP1YDR463W 1560 nt3.01□□□□□ -1.93
YNL040WP53960 YEL032C-AYEL032C-A 162 nt3.01□□□□□ -1.93
YNL040WP53960 HMF1YER057C 390 nt3.01□□□□□ -1.93
YNL040WP53960 KEG1YFR042W 603 nt3.01□□□□□ -1.93
YNL040WP53960 RPL15AYLR029C 615 nt3.01□□□□□ -1.93
YNL040WP53960 YLR412C-AYLR412C-A 207 nt3.01□□□□□ -1.93
YNL040WP53960 SMA2YML066C 1110 nt3.01□□□□□ -1.93
YNL040WP53960 TAF3YPL011C 1062 nt3.01□□□□□ -1.93
YNL040WP53960 TOP1YOL006C 2310 nt3.01□□□□□ -1.93
YNL040WP53960 ILS1YBL076C 3219 nt3□□□□□ -1.93
YNL040WP53960 MGT1YDL200C 567 nt3□□□□□ -1.93
YNL040WP53960 RPL23BYER117W 414 nt3□□□□□ -1.93
YNL040WP53960 IMP3YHR148W 552 nt3□□□□□ -1.93
YNL040WP53960 YLR311CYLR311C 348 nt3□□□□□ -1.93
YNL040WP53960 YLR444CYLR444C 303 nt3□□□□□ -1.93
YNL040WP53960 YMR178WYMR178W 825 nt3□□□□□ -1.93
YNL040WP53960 YNL162W-AYNL162W-A 219 nt3□□□□□ -1.93
YNL040WP53960 YPR050CYPR050C 414 nt3□□□□□ -1.93
YNL040WP53960 SEC15YGL233W 2733 nt3□□□□□ -1.93
YNL040WP53960 YDR089WYDR089W 2610 nt3□□□□□ -1.93
YNL040WP53960 AEP2YMR282C 1743 nt2.99□□□□□ -1.93
YNL040WP53960 MIG1YGL035C 1515 nt2.99□□□□□ -1.93
YNL040WP53960 TLG1YDR468C 675 nt2.99□□□□□ -1.93
YNL040WP53960 YGL218WYGL218W 651 nt2.99□□□□□ -1.93
YNL040WP53960 SOL3YHR163W 750 nt2.99□□□□□ -1.93
YNL040WP53960 PSY3YLR376C 729 nt2.99□□□□□ -1.93
YNL040WP53960 YMR087WYMR087W 855 nt2.99□□□□□ -1.93
YNL040WP53960 RLP7YNL002C 969 nt2.99□□□□□ -1.93
YNL040WP53960 AAH1YNL141W 1044 nt2.99□□□□□ -1.93
YNL040WP53960 RUF5-1RUF5-1 710 nt2.99□□□□□ -1.93
YNL040WP53960 RUF5-2RUF5-2 710 nt2.99□□□□□ -1.93
YNL040WP53960 YOL166CYOL166C 339 nt2.99□□□□□ -1.93
YNL040WP53960 YCL001W-AYCL001W-A 462 nt2.99□□□□□ -1.93
YNL040WP53960 MIP6YHR015W 1980 nt2.99□□□□□ -1.93
YNL040WP53960 PBI1YPL272C 1554 nt2.99□□□□□ -1.93
YNL040WP53960 ROM1YGR070W 3468 nt2.99□□□□□ -1.93
YNL040WP53960 BUD4YJR092W 4344 nt2.99□□□□□ -1.93
YNL040WP53960 CCM1YGR150C 2595 nt2.99□□□□□ -1.93
YNL040WP53960 ITC1YGL133W 3795 nt2.99□□□□□ -1.93
YNL040WP53960 DBP7YKR024C 2229 nt2.99□□□□□ -1.93
YNL040WP53960 ECM21YBL101C 3354 nt2.98□□□□□ -1.93
YNL040WP53960 RPS29BYDL061C 171 nt2.98□□□□□ -1.93
YNL040WP53960 YDL186WYDL186W 834 nt2.98□□□□□ -1.93
YNL040WP53960 YDR340WYDR340W 303 nt2.98□□□□□ -1.93
YNL040WP53960 FRQ1YDR373W 573 nt2.98□□□□□ -1.93
YNL040WP53960 AST2YER101C 1293 nt2.98□□□□□ -1.93
YNL040WP53960 KXD1YGL079W 657 nt2.98□□□□□ -1.93
YNL040WP53960 LSM1YJL124C 519 nt2.98□□□□□ -1.93
YNL040WP53960 RSM26YJR101W 801 nt2.98□□□□□ -1.93
YNL040WP53960 PBA1YLR199C 831 nt2.98□□□□□ -1.93
YNL040WP53960 RPC34YNR003C 954 nt2.98□□□□□ -1.93
YNL040WP53960 HNT3YOR258W 654 nt2.98□□□□□ -1.93
YNL040WP53960 SUR1YPL057C 1149 nt2.98□□□□□ -1.93
YNL040WP53960 YPR142CYPR142C 564 nt2.98□□□□□ -1.93
YNL040WP53960 YGR237CYGR237C 2358 nt2.98□□□□□ -1.93
YNL040WP53960 SIN4YNL236W 2925 nt2.98□□□□□ -1.93
YNL040WP53960 YDL199CYDL199C 2064 nt2.97□□□□□ -1.93
YNL040WP53960 BEM4YPL161C 1902 nt2.97□□□□□ -1.93
YNL040WP53960 RDI1YDL135C 609 nt2.97□□□□□ -1.93
YNL040WP53960 NSA2YER126C 786 nt2.97□□□□□ -1.93
YNL040WP53960 CGR1YGL029W 363 nt2.97□□□□□ -1.93
YNL040WP53960 MPC1YGL080W 393 nt2.97□□□□□ -1.93
YNL040WP53960 YJR111CYJR111C 852 nt2.97□□□□□ -1.93
YNL040WP53960 LAC1YKL008C 1257 nt2.97□□□□□ -1.93
YNL040WP53960 YKL033W-AYKL033W-A 711 nt2.97□□□□□ -1.93
YNL040WP53960 SIC1YLR079W 855 nt2.97□□□□□ -1.93
YNL040WP53960 RUF20RUF20 443 nt2.97□□□□□ -1.93
YNL040WP53960 PPT2YPL148C 522 nt2.97□□□□□ -1.93
YNL040WP53960 YPR077CYPR077C 372 nt2.97□□□□□ -1.93
YNL040WP53960 CDC20YGL116W 1833 nt2.97□□□□□ -1.93
YNL040WP53960 ECM18YDR125C 1362 nt2.97□□□□□ -1.93
YNL040WP53960 BCS1YDR375C 1371 nt2.97□□□□□ -1.93
YNL040WP53960 SKN7YHR206W 1869 nt2.96□□□□□ -1.93
YNL040WP53960 RRI1YDL216C 1323 nt2.96□□□□□ -1.93
YNL040WP53960 DYN1YKR054C 12279 nt2.96□□□□□ -1.94
YNL040WP53960 YGR067CYGR067C 2415 nt2.96□□□□□ -1.94
YNL040WP53960 TGL2YDR058C 981 nt2.96□□□□□ -1.94
YNL040WP53960 BMH2YDR099W 822 nt2.96□□□□□ -1.94
YNL040WP53960 YDR149CYDR149C 708 nt2.96□□□□□ -1.94
YNL040WP53960 YDR336WYDR336W 945 nt2.96□□□□□ -1.94
YNL040WP53960 LST7YGR057C 729 nt2.96□□□□□ -1.94
YNL040WP53960 ATG27YJL178C 816 nt2.96□□□□□ -1.94
YNL040WP53960 RPS22AYJL190C 393 nt2.96□□□□□ -1.94
YNL040WP53960 RPL8BYLL045C 771 nt2.96□□□□□ -1.94
YNL040WP53960 HUB1YNR032C-A 222 nt2.96□□□□□ -1.94
YNL040WP53960 PEX11YOL147C 711 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms