Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 NTH1YDR001C 2256 nt3.53□□□□□ -1.85 RIP-Chip
SCD6P45978 SEC59YMR013C 1560 nt3.52□□□□□ -1.85
SCD6P45978 snR83snR83 306 nt3.52□□□□□ -1.85
SCD6P45978 tC(GCA)BtC(GCA)B 72 nt3.52□□□□□ -1.85
SCD6P45978 tC(GCA)GtC(GCA)G 72 nt3.52□□□□□ -1.85
SCD6P45978 tC(GCA)P1tC(GCA)P1 72 nt3.52□□□□□ -1.85
SCD6P45978 tC(GCA)P2tC(GCA)P2 72 nt3.52□□□□□ -1.85
SCD6P45978 MGA1YGR249W 1371 nt3.51□□□□□ -1.85
SCD6P45978 YHR080CYHR080C 4038 nt3.51□□□□□ -1.85 RIP-Chip
SCD6P45978 STU1YBL034C 4542 nt3.51□□□□□ -1.85 RIP-Chip
SCD6P45978 NAT1YDL040C 2565 nt3.51□□□□□ -1.85
SCD6P45978 HTB1YDR224C 396 nt3.51□□□□□ -1.85
SCD6P45978 YGL242CYGL242C 546 nt3.51□□□□□ -1.85
SCD6P45978 PEF1YGR058W 1008 nt3.51□□□□□ -1.85 RIP-Chip
SCD6P45978 YJL032WYJL032W 315 nt3.51□□□□□ -1.85
SCD6P45978 ENT3YJR125C 1227 nt3.51□□□□□ -1.85
SCD6P45978 FIG1YBR040W 897 nt3.51□□□□□ -1.85
SCD6P45978 SRL4YPL033C 846 nt3.51□□□□□ -1.85
SCD6P45978 RAD26YJR035W 3258 nt3.51□□□□□ -1.85
SCD6P45978 AUS1YOR011W 4185 nt3.51□□□□□ -1.85
SCD6P45978 VID27YNL212W 2349 nt3.5□□□□□ -1.85
SCD6P45978 SEG1YMR086W 2883 nt3.5□□□□□ -1.85
SCD6P45978 RRN7YJL025W 1545 nt3.5□□□□□ -1.85
SCD6P45978 FLO10YKR102W 3510 nt3.5□□□□□ -1.85
SCD6P45978 REC8YPR007C 2043 nt3.5□□□□□ -1.85
SCD6P45978 YRM1YOR172W 2361 nt3.5□□□□□ -1.85
SCD6P45978 YHL044WYHL044W 708 nt3.5□□□□□ -1.85
SCD6P45978 YAR075WYAR075W 474 nt3.5□□□□□ -1.85
SCD6P45978 YMR310CYMR310C 954 nt3.5□□□□□ -1.85
SCD6P45978 RPA43YOR340C 981 nt3.5□□□□□ -1.85
SCD6P45978 YBR242WYBR242W 717 nt3.5□□□□□ -1.85
SCD6P45978 YPR022CYPR022C 3402 nt3.5□□□□□ -1.85 RIP-Chip
SCD6P45978 GRS2YPR081C 1857 nt3.5□□□□□ -1.85
SCD6P45978 NUP159YIL115C 4383 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 YGL176CYGL176C 1665 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 YPL109CYPL109C 1974 nt3.49□□□□□ -1.85
SCD6P45978 ISW2YOR304W 3363 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 APA2YDR530C 978 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 RGI1YER067W 486 nt3.49□□□□□ -1.85
SCD6P45978 COX23YHR116W 456 nt3.49□□□□□ -1.85
SCD6P45978 tV(CAC)DtV(CAC)D 73 nt3.49□□□□□ -1.85
SCD6P45978 tV(CAC)HtV(CAC)H 73 nt3.49□□□□□ -1.85
SCD6P45978 YAL004WYAL004W 648 nt3.49□□□□□ -1.85
SCD6P45978 PET130YJL023C 1044 nt3.49□□□□□ -1.85
SCD6P45978 IDP2YLR174W 1239 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 SUB1YMR039C 879 nt3.49□□□□□ -1.85
SCD6P45978 SHH3YMR118C 591 nt3.49□□□□□ -1.85
SCD6P45978 SSO2YMR183C 888 nt3.49□□□□□ -1.85
SCD6P45978 GOT1YMR292W 417 nt3.49□□□□□ -1.85
SCD6P45978 DDP1YOR163W 567 nt3.49□□□□□ -1.85
SCD6P45978 YOR366WYOR366W 354 nt3.49□□□□□ -1.85
SCD6P45978 ARL3YPL051W 597 nt3.49□□□□□ -1.85
SCD6P45978 PPT2YPL148C 522 nt3.49□□□□□ -1.85
SCD6P45978 NIP7YPL211W 546 nt3.49□□□□□ -1.85
SCD6P45978 YBR287WYBR287W 1284 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 ARP9YMR033W 1404 nt3.49□□□□□ -1.85
SCD6P45978 YBR238CYBR238C 2196 nt3.49□□□□□ -1.85
SCD6P45978 THR4YCR053W 1545 nt3.49□□□□□ -1.85 RIP-Chip
SCD6P45978 ERB1YMR049C 2424 nt3.49□□□□□ -1.85
SCD6P45978 STT4YLR305C 5703 nt3.49□□□□□ -1.85
SCD6P45978 YLR108CYLR108C 1458 nt3.48□□□□□ -1.85 RIP-Chip
SCD6P45978 SPH1YLR313C 1593 nt3.48□□□□□ -1.85
SCD6P45978 ARG5,6YER069W 2592 nt3.48□□□□□ -1.85
SCD6P45978 COX2Q0250 756 nt3.48□□□□□ -1.85
SCD6P45978 YKL131WYKL131W 522 nt3.48□□□□□ -1.85
SCD6P45978 NBP1YLR457C 960 nt3.48□□□□□ -1.85
SCD6P45978 CSI1YMR025W 888 nt3.48□□□□□ -1.85
SCD6P45978 CUP9YPL177C 921 nt3.48□□□□□ -1.85
SCD6P45978 YPR078CYPR078C 1119 nt3.48□□□□□ -1.85
SCD6P45978 snR42snR42 351 nt3.48□□□□□ -1.85
SCD6P45978 CTP1YBR291C 900 nt3.48□□□□□ -1.85
SCD6P45978 STU2YLR045C 2667 nt3.48□□□□□ -1.85
SCD6P45978 NUP85YJR042W 2235 nt3.48□□□□□ -1.85
SCD6P45978 ACK1YDL203C 1872 nt3.47□□□□□ -1.85
SCD6P45978 YDR261W-AYDR261W-A 1317 nt3.47□□□□□ -1.85
SCD6P45978 MNL1YHR204W 2391 nt3.47□□□□□ -1.85
SCD6P45978 IMD4YML056C 1575 nt3.47□□□□□ -1.85 RIP-Chip
SCD6P45978 PGS1YCL004W 1566 nt3.47□□□□□ -1.85
SCD6P45978 EPO1YMR124W 2832 nt3.47□□□□□ -1.85 RIP-Chip
SCD6P45978 DTD1YDL219W 453 nt3.47□□□□□ -1.85
SCD6P45978 PHM6YDR281C 315 nt3.47□□□□□ -1.85
SCD6P45978 YGR190CYGR190C 366 nt3.47□□□□□ -1.85
SCD6P45978 THP2YHR167W 786 nt3.47□□□□□ -1.85 RIP-Chip
SCD6P45978 YHR180WYHR180W 492 nt3.47□□□□□ -1.85
SCD6P45978 GLG2YJL137C 1143 nt3.47□□□□□ -1.85
SCD6P45978 RCN1YKL159C 636 nt3.47□□□□□ -1.85
SCD6P45978 GLO1YML004C 981 nt3.47□□□□□ -1.85
SCD6P45978 RPS10AYOR293W 318 nt3.47□□□□□ -1.85 RIP-Chip
SCD6P45978 UTP25YIL091C 2166 nt3.46□□□□□ -1.85 RIP-Chip
SCD6P45978 YPR003CYPR003C 2265 nt3.46□□□□□ -1.85 RIP-Chip
SCD6P45978 YDR042CYDR042C 603 nt3.46□□□□□ -1.86
SCD6P45978 WBP1YEL002C 1293 nt3.46□□□□□ -1.86
SCD6P45978 STE2YFL026W 1296 nt3.46□□□□□ -1.86
SCD6P45978 CCE1YKL011C 1062 nt3.46□□□□□ -1.86 RIP-Chip
SCD6P45978 SIL1YOL031C 1266 nt3.46□□□□□ -1.86
SCD6P45978 RAS1YOR101W 930 nt3.46□□□□□ -1.86
SCD6P45978 YOR238WYOR238W 912 nt3.46□□□□□ -1.86
SCD6P45978 HNT3YOR258W 654 nt3.46□□□□□ -1.86
SCD6P45978 FYV5YCL058C 459 nt3.46□□□□□ -1.86
SCD6P45978 RPA190YOR341W 4995 nt3.46□□□□□ -1.86 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms