Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
HmgclP38060 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HmgclP38060 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HmgclP38060 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HmgclP38060 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Gm18671-201ENSMUST00000214826 683 ntBASIC18.51■□□□□ 0.55
HmgclP38060 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HmgclP38060 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HmgclP38060 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HmgclP38060 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.5■□□□□ 0.55
HmgclP38060 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HmgclP38060 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HmgclP38060 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
HmgclP38060 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HmgclP38060 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.5■□□□□ 0.55
HmgclP38060 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HmgclP38060 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 Gm15039-201ENSMUST00000118914 875 ntBASIC18.49■□□□□ 0.55
HmgclP38060 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.49■□□□□ 0.55
HmgclP38060 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.49■□□□□ 0.55
HmgclP38060 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.49■□□□□ 0.55
HmgclP38060 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.49■□□□□ 0.55
HmgclP38060 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HmgclP38060 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HmgclP38060 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Gm8495-201ENSMUST00000188740 694 ntBASIC18.48■□□□□ 0.55
HmgclP38060 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HmgclP38060 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.47■□□□□ 0.55
HmgclP38060 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HmgclP38060 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.47■□□□□ 0.55
HmgclP38060 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.47■□□□□ 0.55
HmgclP38060 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
HmgclP38060 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.47■□□□□ 0.55
HmgclP38060 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.47■□□□□ 0.55
HmgclP38060 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HmgclP38060 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.46■□□□□ 0.55
HmgclP38060 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 AV356131-201ENSMUST00000206201 750 ntBASIC18.46■□□□□ 0.55
HmgclP38060 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.46■□□□□ 0.55
HmgclP38060 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HmgclP38060 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HmgclP38060 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.46■□□□□ 0.54
HmgclP38060 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HmgclP38060 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HmgclP38060 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HmgclP38060 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HmgclP38060 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.45■□□□□ 0.54
HmgclP38060 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms