Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLP35914 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLP35914 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLP35914 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
HMGCLP35914 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 AC026271.2-201ENST00000428091 497 ntBASIC21.24■□□□□ 0.99
HMGCLP35914 RARRES2P6-201ENST00000567333 442 ntBASIC21.24■□□□□ 0.99
HMGCLP35914 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.24■□□□□ 0.99
HMGCLP35914 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HMGCLP35914 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLP35914 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.24■□□□□ 0.99
HMGCLP35914 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLP35914 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLP35914 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCLP35914 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLP35914 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLP35914 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCLP35914 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.23■□□□□ 0.99
HMGCLP35914 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HMGCLP35914 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 AC244015.2-201ENST00000616358 1861 ntBASIC21.22■□□□□ 0.99
HMGCLP35914 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCLP35914 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGCLP35914 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HMGCLP35914 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLP35914 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 KRT87P-202ENST00000534226 1464 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HMGCLP35914 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCLP35914 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L2-201ENST00000561772 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 AC087623.3-201ENST00000607047 1098 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L6-201ENST00000626483 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L1-201ENST00000627662 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L8-201ENST00000629013 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L3-201ENST00000630187 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L7-201ENST00000630678 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 DUX4L5-201ENST00000630834 1275 ntBASIC21.21■□□□□ 0.99
HMGCLP35914 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGCLP35914 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLP35914 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.2■□□□□ 0.99
HMGCLP35914 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCLP35914 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.2■□□□□ 0.98
HMGCLP35914 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HMGCLP35914 AC034268.1-201ENST00000441047 882 ntBASIC21.2■□□□□ 0.98
HMGCLP35914 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.2■□□□□ 0.98
HMGCLP35914 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.2■□□□□ 0.98
HMGCLP35914 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.2■□□□□ 0.98
HMGCLP35914 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLP35914 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.19■□□□□ 0.98
HMGCLP35914 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HMGCLP35914 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCLP35914 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.19■□□□□ 0.98
HMGCLP35914 EEF1DP3-203ENST00000566025 782 ntBASIC21.19■□□□□ 0.98
HMGCLP35914 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 AC053503.5-201ENST00000601508 636 ntBASIC21.19■□□□□ 0.98
HMGCLP35914 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCLP35914 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLP35914 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.19■□□□□ 0.98
HMGCLP35914 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCLP35914 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HMGCLP35914 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLP35914 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLP35914 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCLP35914 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGCLP35914 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms