Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ercc1P07903 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ercc1P07903 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ercc1P07903 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ercc1P07903 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.68■□□□□ 0.1
Ercc1P07903 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc1P07903 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ercc1P07903 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ercc1P07903 Gm45102-201ENSMUST00000207427 857 ntBASIC15.67■□□□□ 0.1
Ercc1P07903 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ercc1P07903 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.67■□□□□ 0.1
Ercc1P07903 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.67■□□□□ 0.1
Ercc1P07903 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc1P07903 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ercc1P07903 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc1P07903 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Rarb-207ENSMUST00000225921 2756 ntBASIC15.65■□□□□ 0.1
Ercc1P07903 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.65■□□□□ 0.1
Ercc1P07903 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.65■□□□□ 0.1
Ercc1P07903 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.65■□□□□ 0.1
Ercc1P07903 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.65■□□□□ 0.1
Ercc1P07903 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc1P07903 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ercc1P07903 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.64■□□□□ 0.09
Ercc1P07903 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ercc1P07903 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ercc1P07903 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc1P07903 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ercc1P07903 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ercc1P07903 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc1P07903 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc1P07903 Gm14117-201ENSMUST00000122417 843 ntBASIC15.63■□□□□ 0.09
Ercc1P07903 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms