Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06336 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06336 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06336 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P06336 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
P06336 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
P06336 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.27■□□□□ 0.36
P06336 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P06336 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.27■□□□□ 0.35
P06336 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.27■□□□□ 0.35
P06336 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06336 Iqck-206ENSMUST00000208658 2891 ntBASIC17.26■□□□□ 0.35
P06336 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.26■□□□□ 0.35
P06336 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Gm6420-201ENSMUST00000193885 723 ntBASIC17.26■□□□□ 0.35
P06336 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P06336 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P06336 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
P06336 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.26■□□□□ 0.35
P06336 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P06336 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06336 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
P06336 Nespas-201ENSMUST00000143738 1083 ntBASIC17.25■□□□□ 0.35
P06336 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P06336 Gm7291-201ENSMUST00000199147 382 ntBASIC17.25■□□□□ 0.35
P06336 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.25■□□□□ 0.35
P06336 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.25■□□□□ 0.35
P06336 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.25■□□□□ 0.35
P06336 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06336 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.24■□□□□ 0.35
P06336 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P06336 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06336 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.23■□□□□ 0.35
P06336 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.23■□□□□ 0.35
P06336 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.23■□□□□ 0.35
P06336 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.23■□□□□ 0.35
P06336 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
P06336 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
P06336 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
P06336 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06336 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P06336 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P06336 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms