Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.43■□□□□ 0.22
P04224 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.43■□□□□ 0.22
P04224 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
P04224 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04224 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
P04224 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.42■□□□□ 0.22
P04224 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.42■□□□□ 0.22
P04224 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.42■□□□□ 0.22
P04224 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P04224 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.42■□□□□ 0.22
P04224 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.42■□□□□ 0.22
P04224 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.42■□□□□ 0.22
P04224 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.42■□□□□ 0.22
P04224 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
P04224 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
P04224 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
P04224 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P04224 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
P04224 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04224 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Gm43530-201ENSMUST00000195920 274 ntBASIC16.41■□□□□ 0.22
P04224 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
P04224 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
P04224 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
P04224 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
P04224 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.41■□□□□ 0.22
P04224 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
P04224 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04224 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.4■□□□□ 0.22
P04224 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Gm15820-201ENSMUST00000201566 728 ntBASIC16.4■□□□□ 0.22
P04224 Gm9870-201ENSMUST00000063874 645 ntBASIC16.4■□□□□ 0.22
P04224 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.4■□□□□ 0.22
P04224 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
P04224 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04224 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.4■□□□□ 0.22
P04224 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
P04224 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
P04224 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.39■□□□□ 0.21
P04224 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.39■□□□□ 0.21
P04224 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04224 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
P04224 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
P04224 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.38■□□□□ 0.21
P04224 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.38■□□□□ 0.21
P04224 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms