Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Becn1O88597 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Becn1O88597 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Becn1O88597 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Becn1O88597 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.4■■□□□ 1.02
Becn1O88597 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Becn1O88597 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.4■■□□□ 1.02
Becn1O88597 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Becn1O88597 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
Becn1O88597 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Becn1O88597 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Becn1O88597 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Becn1O88597 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.39■■□□□ 1.01
Becn1O88597 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Becn1O88597 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Becn1O88597 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Becn1O88597 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.38■■□□□ 1.01
Becn1O88597 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.38■■□□□ 1.01
Becn1O88597 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Becn1O88597 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Becn1O88597 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.38■■□□□ 1.01
Becn1O88597 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.38■■□□□ 1.01
Becn1O88597 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Becn1O88597 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.38■■□□□ 1.01
Becn1O88597 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Becn1O88597 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Becn1O88597 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Becn1O88597 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Becn1O88597 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.37■■□□□ 1.01
Becn1O88597 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
Becn1O88597 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Becn1O88597 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.36■■□□□ 1.01
Becn1O88597 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Becn1O88597 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
Becn1O88597 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Becn1O88597 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.34■■□□□ 1.01
Becn1O88597 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Becn1O88597 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Becn1O88597 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.34■■□□□ 1.01
Becn1O88597 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms