Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHF1O43189 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHF1O43189 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF1O43189 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF1O43189 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.29■□□□□ 0.52
PHF1O43189 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.29■□□□□ 0.52
PHF1O43189 IGHV3-19-201ENST00000521488 291 ntBASIC18.29■□□□□ 0.52
PHF1O43189 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PHF1O43189 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PHF1O43189 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.29■□□□□ 0.52
PHF1O43189 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHF1O43189 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PHF1O43189 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHF1O43189 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PHF1O43189 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PHF1O43189 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHF1O43189 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 CCDC92B-201ENST00000575506 885 ntBASIC18.28■□□□□ 0.52
PHF1O43189 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHF1O43189 MIR6084-201ENST00000622012 110 ntBASIC18.28■□□□□ 0.52
PHF1O43189 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PHF1O43189 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHF1O43189 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PHF1O43189 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PHF1O43189 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.27■□□□□ 0.52
PHF1O43189 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHF1O43189 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHF1O43189 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PHF1O43189 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.27■□□□□ 0.52
PHF1O43189 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHF1O43189 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHF1O43189 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.27■□□□□ 0.52
PHF1O43189 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PHF1O43189 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.27■□□□□ 0.52
PHF1O43189 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PHF1O43189 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.27■□□□□ 0.51
PHF1O43189 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHF1O43189 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHF1O43189 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PHF1O43189 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
PHF1O43189 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PHF1O43189 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PHF1O43189 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.26■□□□□ 0.51
PHF1O43189 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.26■□□□□ 0.51
PHF1O43189 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHF1O43189 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PHF1O43189 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHF1O43189 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.25■□□□□ 0.51
PHF1O43189 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.25■□□□□ 0.51
PHF1O43189 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHF1O43189 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.25■□□□□ 0.51
PHF1O43189 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.25■□□□□ 0.51
PHF1O43189 TMEM191A-211ENST00000637163 1067 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms