Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-5A0A075B621 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-5A0A075B621 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-5A0A075B621 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-5A0A075B621 Gm40881-201ENSMUST00000223397 166 ntBASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Fst-202ENSMUST00000223640 2612 ntBASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-5A0A075B621 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-5A0A075B621 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Gm10232-201ENSMUST00000089221 720 ntBASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-5A0A075B621 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Gm43566-201ENSMUST00000196851 808 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms