Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Gm13146-201ENSMUST00000118508 780 ntBASIC19■□□□□ 0.63
Cldn3Q9Z0G9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 CT010467.1-202ENSMUST00000205406 714 ntBASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn3Q9Z0G9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn3Q9Z0G9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn3Q9Z0G9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn3Q9Z0G9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn3Q9Z0G9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn3Q9Z0G9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms