Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA4Q9Y5G9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGA4Q9Y5G9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA4Q9Y5G9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 AC087239.1-201ENST00000622671 572 ntBASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGA4Q9Y5G9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDHGA4Q9Y5G9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 AC010141.3-201ENST00000456659 717 ntBASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA4Q9Y5G9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA4Q9Y5G9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms