Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 AC244015.2-201ENST00000616358 1861 ntBASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 UNC93B8-201ENST00000511903 705 ntBASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB16Q9NRJ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 AC010542.4-201ENST00000563151 1910 ntBASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 AL031602.1-201ENST00000633169 911 ntBASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB16Q9NRJ7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 pRNA.6-201ENST00000610482 90 ntBASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 pRNA.5-201ENST00000612139 90 ntBASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 pRNA.11-201ENST00000618423 90 ntBASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 pRNA.13-201ENST00000619112 90 ntBASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB16Q9NRJ7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB16Q9NRJ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB16Q9NRJ7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.39■□□□□ 0.54
PCDHB16Q9NRJ7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 OR7E47P-201ENST00000546390 1422 ntBASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 FAM99A-202ENST00000538190 1989 ntBASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB16Q9NRJ7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB16Q9NRJ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms