Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col20a1Q923P0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col20a1Q923P0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col20a1Q923P0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Col20a1Q923P0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.3■■□□□ 1.16
Col20a1Q923P0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Col20a1Q923P0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.29■■□□□ 1.16
Col20a1Q923P0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col20a1Q923P0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.28■■□□□ 1.16
Col20a1Q923P0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col20a1Q923P0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col20a1Q923P0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col20a1Q923P0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.27■■□□□ 1.16
Col20a1Q923P0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.27■■□□□ 1.16
Col20a1Q923P0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col20a1Q923P0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Col20a1Q923P0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Col20a1Q923P0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col20a1Q923P0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.25■■□□□ 1.15
Col20a1Q923P0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Gm37856-201ENSMUST00000191634 999 ntBASIC22.25■■□□□ 1.15
Col20a1Q923P0 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.25■■□□□ 1.15
Col20a1Q923P0 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.25■■□□□ 1.15
Col20a1Q923P0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col20a1Q923P0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Col20a1Q923P0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.24■■□□□ 1.15
Col20a1Q923P0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Gm8520-201ENSMUST00000186517 868 ntBASIC22.24■■□□□ 1.15
Col20a1Q923P0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.24■■□□□ 1.15
Col20a1Q923P0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col20a1Q923P0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col20a1Q923P0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Golph3-202ENSMUST00000226517 2359 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms