Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhga4Q91XY4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga4Q91XY4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Reep4-203ENSMUST00000226563 1444 ntBASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga4Q91XY4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga4Q91XY4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Gm26571-201ENSMUST00000181399 666 ntBASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhga4Q91XY4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga4Q91XY4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Pcdhga4Q91XY4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga4Q91XY4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhga4Q91XY4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Golph3-205ENSMUST00000228671 2842 ntBASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhga4Q91XY4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms