Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Gm13234-201ENSMUST00000120010 747 ntBASIC18.13■□□□□ 0.49
SynpoQ8CC35 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SynpoQ8CC35 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SynpoQ8CC35 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 Golph3-205ENSMUST00000228671 2842 ntBASIC18.12■□□□□ 0.49
SynpoQ8CC35 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SynpoQ8CC35 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.11■□□□□ 0.49
SynpoQ8CC35 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Reep4-203ENSMUST00000226563 1444 ntBASIC18.11■□□□□ 0.49
SynpoQ8CC35 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SynpoQ8CC35 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SynpoQ8CC35 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
SynpoQ8CC35 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.09■□□□□ 0.49
SynpoQ8CC35 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SynpoQ8CC35 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SynpoQ8CC35 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SynpoQ8CC35 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SynpoQ8CC35 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SynpoQ8CC35 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SynpoQ8CC35 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.08■□□□□ 0.49
SynpoQ8CC35 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.08■□□□□ 0.48
SynpoQ8CC35 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SynpoQ8CC35 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SynpoQ8CC35 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SynpoQ8CC35 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SynpoQ8CC35 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.07■□□□□ 0.48
SynpoQ8CC35 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms