Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig4Q8BTF7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig4Q8BTF7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Lig4Q8BTF7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lig4Q8BTF7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Lig4Q8BTF7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.86■□□□□ 0.77
Lig4Q8BTF7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Gm6211-202ENSMUST00000167849 925 ntBASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lig4Q8BTF7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.84■□□□□ 0.77
Lig4Q8BTF7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms