Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 AC105020.6-201ENST00000621523 1217 ntBASIC11.92□□□□□ -0.5
UBR4Q5T4S7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AP003071.4-201ENST00000562276 1284 ntBASIC11.91□□□□□ -0.5
UBR4Q5T4S7 SOX15-203ENST00000570788 1093 ntBASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AC069236.1-201ENST00000604339 616 ntBASIC11.91□□□□□ -0.5
UBR4Q5T4S7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AC097639.1-201ENST00000565519 1891 ntBASIC11.91□□□□□ -0.5
UBR4Q5T4S7 AP001412.1-201ENST00000608405 714 ntBASIC11.9□□□□□ -0.5
UBR4Q5T4S7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 AL135905.2-201ENST00000584934 1404 ntBASIC11.9□□□□□ -0.5
UBR4Q5T4S7 DUSP8P5-201ENST00000422884 1815 ntBASIC11.9□□□□□ -0.5
UBR4Q5T4S7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.9□□□□□ -0.5
UBR4Q5T4S7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.9□□□□□ -0.51
UBR4Q5T4S7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.89□□□□□ -0.51
UBR4Q5T4S7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 AL137013.1-201ENST00000432946 1228 ntBASIC11.89□□□□□ -0.51
UBR4Q5T4S7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms