Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-3Q5R1I1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-3Q5R1I1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav7d-3Q5R1I1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-3Q5R1I1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-3Q5R1I1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-3Q5R1I1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-3Q5R1I1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7d-3Q5R1I1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms