Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lin54Q571G4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lin54Q571G4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lin54Q571G4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lin54Q571G4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lin54Q571G4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.28■□□□□ 0.2
Lin54Q571G4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lin54Q571G4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lin54Q571G4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lin54Q571G4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.27■□□□□ 0.2
Lin54Q571G4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lin54Q571G4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lin54Q571G4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.27■□□□□ 0.19
Lin54Q571G4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lin54Q571G4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lin54Q571G4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.26■□□□□ 0.19
Lin54Q571G4 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.26■□□□□ 0.19
Lin54Q571G4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.26■□□□□ 0.19
Lin54Q571G4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.26■□□□□ 0.19
Lin54Q571G4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lin54Q571G4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Lin54Q571G4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.25■□□□□ 0.19
Lin54Q571G4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lin54Q571G4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.24■□□□□ 0.19
Lin54Q571G4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lin54Q571G4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
Lin54Q571G4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lin54Q571G4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lin54Q571G4 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.24■□□□□ 0.19
Lin54Q571G4 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.24■□□□□ 0.19
Lin54Q571G4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.24■□□□□ 0.19
Lin54Q571G4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lin54Q571G4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin54Q571G4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lin54Q571G4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lin54Q571G4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin54Q571G4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin54Q571G4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms