Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zfp560Q3URI6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zfp560Q3URI6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zfp560Q3URI6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zfp560Q3URI6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zfp560Q3URI6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Zfp560Q3URI6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zfp560Q3URI6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Zfp560Q3URI6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Gm42569-201ENSMUST00000200539 472 ntBASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp560Q3URI6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Gm26571-201ENSMUST00000181399 666 ntBASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp560Q3URI6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.81■□□□□ 0.6
Zfp560Q3URI6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp560Q3URI6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp560Q3URI6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Gm10849-201ENSMUST00000100397 618 ntBASIC18.78■□□□□ 0.6
Zfp560Q3URI6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Gm7514-201ENSMUST00000209475 934 ntBASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp560Q3URI6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp560Q3URI6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms