Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2DP55273 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.11■□□□□ 0.97
CDKN2DP55273 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.11■□□□□ 0.97
CDKN2DP55273 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.11■□□□□ 0.97
CDKN2DP55273 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.11■□□□□ 0.97
CDKN2DP55273 AF106564.1-201ENST00000607058 2553 ntBASIC21.11■□□□□ 0.97
CDKN2DP55273 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
CDKN2DP55273 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2DP55273 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2DP55273 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2DP55273 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDKN2DP55273 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
CDKN2DP55273 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.1■□□□□ 0.97
CDKN2DP55273 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.1■□□□□ 0.97
CDKN2DP55273 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 AC027682.1-201ENST00000562846 899 ntBASIC21.1■□□□□ 0.97
CDKN2DP55273 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.1■□□□□ 0.97
CDKN2DP55273 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDKN2DP55273 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDKN2DP55273 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.1■□□□□ 0.97
CDKN2DP55273 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.09■□□□□ 0.97
CDKN2DP55273 AP006587.3-201ENST00000525742 1516 ntBASIC21.09■□□□□ 0.97
CDKN2DP55273 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 FEM1AP4-201ENST00000443167 1987 ntBASIC21.09■□□□□ 0.97
CDKN2DP55273 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 EDA-201ENST00000338901 1233 ntBASIC21.09■□□□□ 0.97
CDKN2DP55273 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.09■□□□□ 0.97
CDKN2DP55273 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.09■□□□□ 0.97
CDKN2DP55273 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDKN2DP55273 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 TSPY26P-201ENST00000476365 1326 ntBASIC21.08■□□□□ 0.97
CDKN2DP55273 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.08■□□□□ 0.97
CDKN2DP55273 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.08■□□□□ 0.97
CDKN2DP55273 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.08■□□□□ 0.97
CDKN2DP55273 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.08■□□□□ 0.97
CDKN2DP55273 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.08■□□□□ 0.97
CDKN2DP55273 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.08■□□□□ 0.97
CDKN2DP55273 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.08■□□□□ 0.97
CDKN2DP55273 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.08■□□□□ 0.97
CDKN2DP55273 AL031432.3-201ENST00000607698 485 ntBASIC21.08■□□□□ 0.97
CDKN2DP55273 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDKN2DP55273 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDKN2DP55273 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDKN2DP55273 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.07■□□□□ 0.96
CDKN2DP55273 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CDKN2DP55273 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.07■□□□□ 0.96
CDKN2DP55273 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CDKN2DP55273 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.07■□□□□ 0.96
CDKN2DP55273 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.07■□□□□ 0.96
CDKN2DP55273 AF213884.3-201ENST00000563833 479 ntBASIC21.07■□□□□ 0.96
CDKN2DP55273 AL355001.2-201ENST00000620617 1191 ntBASIC21.07■□□□□ 0.96
CDKN2DP55273 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDKN2DP55273 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.07■□□□□ 0.96
CDKN2DP55273 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDKN2DP55273 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.07■□□□□ 0.96
CDKN2DP55273 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.06■□□□□ 0.96
CDKN2DP55273 MIR939-201ENST00000401314 82 ntBASIC21.06■□□□□ 0.96
CDKN2DP55273 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CDKN2DP55273 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.06■□□□□ 0.96
CDKN2DP55273 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDKN2DP55273 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
CDKN2DP55273 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
CDKN2DP55273 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDKN2DP55273 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDKN2DP55273 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.05■□□□□ 0.96
CDKN2DP55273 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms