Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 YFL002W-BYFL002W-B 1317 nt5.12□□□□□ -1.59
CTH1P47976 YGR161W-AYGR161W-A 1317 nt5.12□□□□□ -1.59
CTH1P47976 ZRC1YMR243C 1329 nt5.12□□□□□ -1.59
CTH1P47976 YBL100W-AYBL100W-A 1317 nt5.12□□□□□ -1.59
CTH1P47976 YCL020WYCL020W 1317 nt5.12□□□□□ -1.59
CTH1P47976 DNF2YDR093W 4839 nt5.11□□□□□ -1.59
CTH1P47976 CCZ1YBR131W 2115 nt5.11□□□□□ -1.59
CTH1P47976 RAD53YPL153C 2466 nt5.11□□□□□ -1.59
CTH1P47976 SPT2YER161C 1002 nt5.11□□□□□ -1.59
CTH1P47976 LSB1YGR136W 726 nt5.11□□□□□ -1.59
CTH1P47976 GPP1YIL053W 753 nt5.11□□□□□ -1.59
CTH1P47976 EOS1YNL080C 1101 nt5.11□□□□□ -1.59
CTH1P47976 TMA16YOR252W 537 nt5.11□□□□□ -1.59
CTH1P47976 PBN1YCL052C 1251 nt5.11□□□□□ -1.59
CTH1P47976 AGE1YDR524C 1449 nt5.11□□□□□ -1.59
CTH1P47976 ZPR1YGR211W 1461 nt5.11□□□□□ -1.59
CTH1P47976 SUC2YIL162W 1599 nt5.11□□□□□ -1.59
CTH1P47976 ORC4YPR162C 1590 nt5.11□□□□□ -1.59
CTH1P47976 VHC1YBR235W 3363 nt5.11□□□□□ -1.59
CTH1P47976 THI22YPR121W 1719 nt5.11□□□□□ -1.59
CTH1P47976 RAD4YER162C 2265 nt5.11□□□□□ -1.59
CTH1P47976 CDC37YDR168W 1521 nt5.1□□□□□ -1.59
CTH1P47976 SUR2YDR297W 1050 nt5.1□□□□□ -1.59
CTH1P47976 APA2YDR530C 978 nt5.1□□□□□ -1.59
CTH1P47976 TIP20YGL145W 2106 nt5.1□□□□□ -1.59
CTH1P47976 HUR1YGL168W 333 nt5.1□□□□□ -1.59
CTH1P47976 GVP36YIL041W 981 nt5.1□□□□□ -1.59
CTH1P47976 YIL068W-AYIL068W-A 384 nt5.1□□□□□ -1.59
CTH1P47976 YJR087WYJR087W 351 nt5.1□□□□□ -1.59
CTH1P47976 ADI1YMR009W 540 nt5.1□□□□□ -1.59
CTH1P47976 YMR087WYMR087W 855 nt5.1□□□□□ -1.59
CTH1P47976 PAH1YMR165C 2589 nt5.1□□□□□ -1.59
CTH1P47976 ATG8YBL078C 354 nt5.1□□□□□ -1.59
CTH1P47976 YPL088WYPL088W 1029 nt5.1□□□□□ -1.59
CTH1P47976 ATG5YPL149W 885 nt5.1□□□□□ -1.59
CTH1P47976 SVS1YPL163C 783 nt5.1□□□□□ -1.59
CTH1P47976 OPY1YBR129C 987 nt5.1□□□□□ -1.59
CTH1P47976 BMT2YBR141C 1014 nt5.1□□□□□ -1.59
CTH1P47976 SNU56YDR240C 1479 nt5.09□□□□□ -1.59
CTH1P47976 NUS1YDL193W 1128 nt5.09□□□□□ -1.59
CTH1P47976 IZH1YDR492W 951 nt5.09□□□□□ -1.59
CTH1P47976 YER087C-AYER087C-A 552 nt5.09□□□□□ -1.59
CTH1P47976 RPL22AYLR061W 366 nt5.09□□□□□ -1.59
CTH1P47976 YSF3YNL138W-A 258 nt5.09□□□□□ -1.59
CTH1P47976 CKA2YOR061W 1020 nt5.09□□□□□ -1.59
CTH1P47976 snR41snR41 95 nt5.09□□□□□ -1.59
CTH1P47976 STP22YCL008C 1158 nt5.09□□□□□ -1.59
CTH1P47976 IMA3YIL172C 1770 nt5.09□□□□□ -1.6
CTH1P47976 IMA4YJL221C 1770 nt5.09□□□□□ -1.6
CTH1P47976 YER158CYER158C 1722 nt5.09□□□□□ -1.6
CTH1P47976 RAD16YBR114W 2373 nt5.08□□□□□ -1.6
CTH1P47976 AAD3YCR107W 1092 nt5.08□□□□□ -1.6
CTH1P47976 RRP42YDL111C 798 nt5.08□□□□□ -1.6
CTH1P47976 YDL240C-AYDL240C-A 138 nt5.08□□□□□ -1.6
CTH1P47976 YDR545C-AYDR545C-A 480 nt5.08□□□□□ -1.6
CTH1P47976 YEL077W-AYEL077W-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YER079WYER079W 633 nt5.08□□□□□ -1.6
CTH1P47976 YER190C-BYER190C-B 483 nt5.08□□□□□ -1.6
CTH1P47976 YFL068WYFL068W 483 nt5.08□□□□□ -1.6
CTH1P47976 YGR039WYGR039W 312 nt5.08□□□□□ -1.6
CTH1P47976 YGR296C-BYGR296C-B 483 nt5.08□□□□□ -1.6
CTH1P47976 YHL050W-AYHL050W-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YHR138CYHR138C 345 nt5.08□□□□□ -1.6
CTH1P47976 YHR219C-AYHR219C-A 483 nt5.08□□□□□ -1.6
CTH1P47976 RPL16AYIL133C 600 nt5.08□□□□□ -1.6
CTH1P47976 SOP4YJL192C 705 nt5.08□□□□□ -1.6
CTH1P47976 YLL066W-AYLL066W-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YLL067W-AYLL067W-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YLR466C-AYLR466C-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YLR467C-AYLR467C-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YML116W-AYML116W-A 303 nt5.08□□□□□ -1.6
CTH1P47976 YML133W-BYML133W-B 483 nt5.08□□□□□ -1.6
CTH1P47976 UBX4YMR067C 1251 nt5.08□□□□□ -1.6
CTH1P47976 YMR130WYMR130W 909 nt5.08□□□□□ -1.6
CTH1P47976 YNL339W-BYNL339W-B 483 nt5.08□□□□□ -1.6
CTH1P47976 BRX1YOL077C 876 nt5.08□□□□□ -1.6
CTH1P47976 YBL113W-AYBL113W-A 483 nt5.08□□□□□ -1.6
CTH1P47976 RBL2YOR265W 321 nt5.08□□□□□ -1.6
CTH1P47976 YOR396C-AYOR396C-A 483 nt5.08□□□□□ -1.6
CTH1P47976 YPL283W-BYPL283W-B 483 nt5.08□□□□□ -1.6
CTH1P47976 YPR204C-AYPR204C-A 483 nt5.08□□□□□ -1.6
CTH1P47976 snR3snR3 194 nt5.08□□□□□ -1.6
CTH1P47976 MAL12YGR292W 1755 nt5.08□□□□□ -1.6
CTH1P47976 MAL32YBR299W 1755 nt5.08□□□□□ -1.6
CTH1P47976 TSL1YML100W 3297 nt5.08□□□□□ -1.6
CTH1P47976 HSP82YPL240C 2130 nt5.08□□□□□ -1.6
CTH1P47976 YCL075WYCL075W 441 nt5.07□□□□□ -1.6
CTH1P47976 YER097WYER097W 330 nt5.07□□□□□ -1.6
CTH1P47976 ZRT1YGL255W 1131 nt5.07□□□□□ -1.6
CTH1P47976 SRP40YKR092C 1221 nt5.07□□□□□ -1.6
CTH1P47976 SDO1YLR022C 753 nt5.07□□□□□ -1.6
CTH1P47976 YOL159CYOL159C 516 nt5.07□□□□□ -1.6
CTH1P47976 YNR065CYNR065C 3351 nt5.06□□□□□ -1.6
CTH1P47976 RIP1YEL024W 648 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)CtK(CUU)C 73 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)D1tK(CUU)D1 73 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)D2tK(CUU)D2 73 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)E1tK(CUU)E1 73 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)E2tK(CUU)E2 73 nt5.06□□□□□ -1.6
CTH1P47976 tK(CUU)FtK(CUU)F 73 nt5.06□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms