Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 DLS1YJL065C 504 nt3.35□□□□□ -1.87
SSN8P47821 SMD2YLR275W 333 nt3.35□□□□□ -1.87
SSN8P47821 YLR290CYLR290C 834 nt3.35□□□□□ -1.87
SSN8P47821 MOH1YBL049W 417 nt3.35□□□□□ -1.87
SSN8P47821 NRK1YNL129W 723 nt3.35□□□□□ -1.87
SSN8P47821 CTP1YBR291C 900 nt3.35□□□□□ -1.87
SSN8P47821 ARO80YDR421W 2853 nt3.35□□□□□ -1.87
SSN8P47821 RPN1YHR027C 2982 nt3.35□□□□□ -1.87
SSN8P47821 SEC6YIL068C 2418 nt3.34□□□□□ -1.87
SSN8P47821 RCY1YJL204C 2523 nt3.34□□□□□ -1.87
SSN8P47821 NRP1YDL167C 2160 nt3.34□□□□□ -1.87
SSN8P47821 RPO21YDL140C 5202 nt3.34□□□□□ -1.87
SSN8P47821 WBP1YEL002C 1293 nt3.34□□□□□ -1.87
SSN8P47821 YEL010WYEL010W 351 nt3.34□□□□□ -1.87
SSN8P47821 COX6YHR051W 447 nt3.34□□□□□ -1.87
SSN8P47821 YAL004WYAL004W 648 nt3.34□□□□□ -1.87
SSN8P47821 ERG20YJL167W 1059 nt3.34□□□□□ -1.87
SSN8P47821 ANB1YJR047C 474 nt3.34□□□□□ -1.87
SSN8P47821 YBL010CYBL010C 843 nt3.34□□□□□ -1.87
SSN8P47821 YNL181WYNL181W 1224 nt3.34□□□□□ -1.87
SSN8P47821 YOL106WYOL106W 354 nt3.34□□□□□ -1.87
SSN8P47821 RAS1YOR101W 930 nt3.34□□□□□ -1.87
SSN8P47821 GIS4YML006C 2325 nt3.34□□□□□ -1.87
SSN8P47821 MSS4YDR208W 2340 nt3.33□□□□□ -1.88
SSN8P47821 PET100YDR079W 336 nt3.33□□□□□ -1.88
SSN8P47821 RUB1YDR139C 234 nt3.33□□□□□ -1.88
SSN8P47821 MAG1YER142C 891 nt3.33□□□□□ -1.88
SSN8P47821 OST5YGL226C-A 261 nt3.33□□□□□ -1.88
SSN8P47821 YGR026WYGR026W 837 nt3.33□□□□□ -1.88
SSN8P47821 FOL2YGR267C 732 nt3.33□□□□□ -1.88
SSN8P47821 YHR032C-AYHR032C-A 120 nt3.33□□□□□ -1.88
SSN8P47821 HIS5YIL116W 1158 nt3.33□□□□□ -1.88
SSN8P47821 YKL131WYKL131W 522 nt3.33□□□□□ -1.88
SSN8P47821 YPR027CYPR027C 834 nt3.33□□□□□ -1.88
SSN8P47821 RTT109YLL002W 1311 nt3.33□□□□□ -1.88
SSN8P47821 ARP9YMR033W 1404 nt3.33□□□□□ -1.88
SSN8P47821 SPA2YLL021W 4401 nt3.33□□□□□ -1.88
SSN8P47821 USA1YML029W 2517 nt3.33□□□□□ -1.88
SSN8P47821 AEP3YPL005W 1821 nt3.33□□□□□ -1.88
SSN8P47821 CUE3YGL110C 1875 nt3.33□□□□□ -1.88
SSN8P47821 ASI1YMR119W 1875 nt3.33□□□□□ -1.88
SSN8P47821 PRM15YMR278W 1869 nt3.33□□□□□ -1.88
SSN8P47821 SPO71YDR104C 3738 nt3.32□□□□□ -1.88
SSN8P47821 AHA1YDR214W 1053 nt3.32□□□□□ -1.88
SSN8P47821 tL(UAG)JtL(UAG)J 82 nt3.32□□□□□ -1.88
SSN8P47821 tL(UAG)L1tL(UAG)L1 82 nt3.32□□□□□ -1.88
SSN8P47821 tL(UAG)L2tL(UAG)L2 82 nt3.32□□□□□ -1.88
SSN8P47821 YJL156W-AYJL156W-A 222 nt3.32□□□□□ -1.88
SSN8P47821 ECM13YBL043W 774 nt3.32□□□□□ -1.88
SSN8P47821 SPN1YPR133C 1233 nt3.32□□□□□ -1.88
SSN8P47821 TAZ1YPR140W 1146 nt3.32□□□□□ -1.88
SSN8P47821 NEM1YHR004C 1341 nt3.32□□□□□ -1.88
SSN8P47821 TCP1YDR212W 1680 nt3.32□□□□□ -1.88
SSN8P47821 DOA4YDR069C 2781 nt3.31□□□□□ -1.88
SSN8P47821 ACK1YDL203C 1872 nt3.31□□□□□ -1.88
SSN8P47821 YGL176CYGL176C 1665 nt3.31□□□□□ -1.88
SSN8P47821 YDL180WYDL180W 1644 nt3.31□□□□□ -1.88
SSN8P47821 ERG9YHR190W 1335 nt3.31□□□□□ -1.88
SSN8P47821 RDS2YPL133C 1341 nt3.31□□□□□ -1.88
SSN8P47821 FAD1YDL045C 921 nt3.31□□□□□ -1.88
SSN8P47821 APA2YDR530C 978 nt3.31□□□□□ -1.88
SSN8P47821 YGL138CYGL138C 1038 nt3.31□□□□□ -1.88
SSN8P47821 YGR190CYGR190C 366 nt3.31□□□□□ -1.88
SSN8P47821 IRC18YJL037W 675 nt3.31□□□□□ -1.88
SSN8P47821 GLG2YJL137C 1143 nt3.31□□□□□ -1.88
SSN8P47821 MAK16YAL025C 921 nt3.31□□□□□ -1.88
SSN8P47821 YJR111CYJR111C 852 nt3.31□□□□□ -1.88
SSN8P47821 YMR158C-AYMR158C-A 138 nt3.31□□□□□ -1.88
SSN8P47821 YOR238WYOR238W 912 nt3.31□□□□□ -1.88
SSN8P47821 SRL4YPL033C 846 nt3.31□□□□□ -1.88
SSN8P47821 OAF3YKR064W 2592 nt3.31□□□□□ -1.88
SSN8P47821 GSC2YGR032W 5688 nt3.31□□□□□ -1.88
SSN8P47821 KIN4YOR233W 2403 nt3.31□□□□□ -1.88
SSN8P47821 AI4Q0065 1671 nt3.3□□□□□ -1.88
SSN8P47821 BI3Q0115 1554 nt3.3□□□□□ -1.88
SSN8P47821 FUN12YAL035W 3009 nt3.3□□□□□ -1.88
SSN8P47821 RPS29BYDL061C 171 nt3.3□□□□□ -1.88
SSN8P47821 BSC2YDR275W 708 nt3.3□□□□□ -1.88
SSN8P47821 SEC53YFL045C 765 nt3.3□□□□□ -1.88
SSN8P47821 MPC3YGR243W 441 nt3.3□□□□□ -1.88
SSN8P47821 EST3YIL009C-A 546 nt3.3□□□□□ -1.88
SSN8P47821 MRPL49YJL096W 486 nt3.3□□□□□ -1.88
SSN8P47821 SFH1YLR321C 1281 nt3.3□□□□□ -1.88
SSN8P47821 YNL050CYNL050C 813 nt3.3□□□□□ -1.88
SSN8P47821 VAM10YOR068C 345 nt3.3□□□□□ -1.88
SSN8P47821 CTM1YHR109W 1758 nt3.3□□□□□ -1.88
SSN8P47821 FAR1YJL157C 2493 nt3.3□□□□□ -1.88
SSN8P47821 FAR8YMR029C 1572 nt3.29□□□□□ -1.88
SSN8P47821 AAD3YCR107W 1092 nt3.29□□□□□ -1.88
SSN8P47821 UBC9YDL064W 474 nt3.29□□□□□ -1.88
SSN8P47821 HTB1YDR224C 396 nt3.29□□□□□ -1.88
SSN8P47821 IRC22YEL001C 678 nt3.29□□□□□ -1.88
SSN8P47821 PMI40YER003C 1290 nt3.29□□□□□ -1.88
SSN8P47821 GPP2YER062C 753 nt3.29□□□□□ -1.88
SSN8P47821 ERJ5YFR041C 888 nt3.29□□□□□ -1.88
SSN8P47821 SCM4YGR049W 564 nt3.29□□□□□ -1.88
SSN8P47821 RSM27YGR215W 333 nt3.29□□□□□ -1.88
SSN8P47821 tV(CAC)DtV(CAC)D 73 nt3.29□□□□□ -1.88
SSN8P47821 tV(CAC)HtV(CAC)H 73 nt3.29□□□□□ -1.88
SSN8P47821 YIL161WYIL161W 708 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms