Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 OST5YGL226C-A 261 nt3.52□□□□□ -1.85
RPH1P39956 MET14YKL001C 609 nt3.52□□□□□ -1.85
RPH1P39956 MBR1YKL093W 1020 nt3.52□□□□□ -1.85
RPH1P39956 YKL123WYKL123W 381 nt3.52□□□□□ -1.85
RPH1P39956 FMP41YNL168C 780 nt3.52□□□□□ -1.85
RPH1P39956 snR17asnR17a 333 nt3.52□□□□□ -1.85
RPH1P39956 FDH2YPL275W 711 nt3.52□□□□□ -1.85
RPH1P39956 MRPL27YBR282W 441 nt3.52□□□□□ -1.85
RPH1P39956 UBX5YDR330W 1503 nt3.52□□□□□ -1.85
RPH1P39956 RRN6YBL014C 2685 nt3.52□□□□□ -1.85
RPH1P39956 UTP5YDR398W 1932 nt3.52□□□□□ -1.85
RPH1P39956 CHD1YER164W 4407 nt3.52□□□□□ -1.85
RPH1P39956 DSS1YMR287C 2910 nt3.51□□□□□ -1.85
RPH1P39956 APP1YNL094W 1764 nt3.51□□□□□ -1.85
RPH1P39956 YDR261W-AYDR261W-A 1317 nt3.51□□□□□ -1.85
RPH1P39956 TRX3YCR083W 384 nt3.51□□□□□ -1.85
RPH1P39956 YDL162CYDL162C 357 nt3.51□□□□□ -1.85
RPH1P39956 LSM4YER112W 564 nt3.51□□□□□ -1.85
RPH1P39956 GCD14YJL125C 1152 nt3.51□□□□□ -1.85
RPH1P39956 FAR3YMR052W 615 nt3.51□□□□□ -1.85
RPH1P39956 RAD14YMR201C 1116 nt3.51□□□□□ -1.85
RPH1P39956 YNL035CYNL035C 1170 nt3.51□□□□□ -1.85
RPH1P39956 RAD4YER162C 2265 nt3.51□□□□□ -1.85
RPH1P39956 NUP159YIL115C 4383 nt3.51□□□□□ -1.85
RPH1P39956 RUB1YDR139C 234 nt3.5□□□□□ -1.85
RPH1P39956 HTB1YDR224C 396 nt3.5□□□□□ -1.85
RPH1P39956 RSM25YIL093C 795 nt3.5□□□□□ -1.85
RPH1P39956 YIL156W-AYIL156W-A 402 nt3.5□□□□□ -1.85
RPH1P39956 YJR037WYJR037W 384 nt3.5□□□□□ -1.85
RPH1P39956 HTA2YBL003C 399 nt3.5□□□□□ -1.85
RPH1P39956 COS1YNL336W 1146 nt3.5□□□□□ -1.85
RPH1P39956 PFK27YOL136C 1194 nt3.5□□□□□ -1.85
RPH1P39956 URC2YDR520C 2319 nt3.5□□□□□ -1.85
RPH1P39956 SLI1YGR212W 1407 nt3.5□□□□□ -1.85
RPH1P39956 REB1YBR049C 2433 nt3.49□□□□□ -1.85
RPH1P39956 NHP10YDL002C 612 nt3.49□□□□□ -1.85
RPH1P39956 FAD1YDL045C 921 nt3.49□□□□□ -1.85
RPH1P39956 UBC9YDL064W 474 nt3.49□□□□□ -1.85
RPH1P39956 YDR535CYDR535C 501 nt3.49□□□□□ -1.85
RPH1P39956 YFL051CYFL051C 483 nt3.49□□□□□ -1.85
RPH1P39956 YGL074CYGL074C 327 nt3.49□□□□□ -1.85
RPH1P39956 SVP26YHR181W 687 nt3.49□□□□□ -1.85
RPH1P39956 DAL2YIR029W 1032 nt3.49□□□□□ -1.85
RPH1P39956 CTK2YJL006C 972 nt3.49□□□□□ -1.85
RPH1P39956 YLR202CYLR202C 327 nt3.49□□□□□ -1.85
RPH1P39956 USV1YPL230W 1176 nt3.49□□□□□ -1.85
RPH1P39956 BI3Q0115 1554 nt3.49□□□□□ -1.85
RPH1P39956 YVC1YOR087W 2028 nt3.49□□□□□ -1.85
RPH1P39956 MIG1YGL035C 1515 nt3.49□□□□□ -1.85
RPH1P39956 YDR131CYDR131C 1671 nt3.49□□□□□ -1.85
RPH1P39956 BUD27YFL023W 2391 nt3.48□□□□□ -1.85
RPH1P39956 ACA1YER045C 1470 nt3.48□□□□□ -1.85
RPH1P39956 RSF2YJR127C 4143 nt3.48□□□□□ -1.85
RPH1P39956 YDR029WYDR029W 315 nt3.48□□□□□ -1.85
RPH1P39956 MIG3YER028C 1185 nt3.48□□□□□ -1.85
RPH1P39956 YGL138CYGL138C 1038 nt3.48□□□□□ -1.85
RPH1P39956 CAB2YIL083C 1098 nt3.48□□□□□ -1.85
RPH1P39956 AHP1YLR109W 531 nt3.48□□□□□ -1.85
RPH1P39956 REH1YLR387C 1299 nt3.48□□□□□ -1.85
RPH1P39956 VMA6YLR447C 1038 nt3.48□□□□□ -1.85
RPH1P39956 SST2YLR452C 2097 nt3.47□□□□□ -1.85
RPH1P39956 YGL176CYGL176C 1665 nt3.47□□□□□ -1.85
RPH1P39956 COS8YHL048W 1146 nt3.47□□□□□ -1.85
RPH1P39956 DOG2YHR043C 741 nt3.47□□□□□ -1.85
RPH1P39956 DOG1YHR044C 741 nt3.47□□□□□ -1.85
RPH1P39956 AIM18YHR198C 966 nt3.47□□□□□ -1.85
RPH1P39956 MED11YMR112C 396 nt3.47□□□□□ -1.85
RPH1P39956 TMC1YOR052C 453 nt3.47□□□□□ -1.85
RPH1P39956 YOR263CYOR263C 408 nt3.47□□□□□ -1.85
RPH1P39956 HSH49YOR319W 642 nt3.47□□□□□ -1.85
RPH1P39956 LOA1YPR139C 903 nt3.47□□□□□ -1.85
RPH1P39956 RRP15YPR143W 753 nt3.47□□□□□ -1.85
RPH1P39956 ERV15YBR210W 429 nt3.47□□□□□ -1.85
RPH1P39956 YKL050CYKL050C 2769 nt3.47□□□□□ -1.85
RPH1P39956 ASI1YMR119W 1875 nt3.47□□□□□ -1.85
RPH1P39956 PUB1YNL016W 1362 nt3.47□□□□□ -1.85
RPH1P39956 HFD1YMR110C 1599 nt3.46□□□□□ -1.85
RPH1P39956 ERT1YBR239C 1590 nt3.46□□□□□ -1.85
RPH1P39956 CEX1YOR112W 2286 nt3.46□□□□□ -1.85
RPH1P39956 VID27YNL212W 2349 nt3.46□□□□□ -1.86
RPH1P39956 YCL075WYCL075W 441 nt3.46□□□□□ -1.86
RPH1P39956 GRX3YDR098C 858 nt3.46□□□□□ -1.86
RPH1P39956 IZH1YDR492W 951 nt3.46□□□□□ -1.86
RPH1P39956 MTC3YGL226W 372 nt3.46□□□□□ -1.86
RPH1P39956 YGL242CYGL242C 546 nt3.46□□□□□ -1.86
RPH1P39956 MTM1YGR257C 1101 nt3.46□□□□□ -1.86
RPH1P39956 YHI9YHR029C 885 nt3.46□□□□□ -1.86
RPH1P39956 YVH1YIR026C 1095 nt3.46□□□□□ -1.86
RPH1P39956 YJR128WYJR128W 360 nt3.46□□□□□ -1.86
RPH1P39956 MOH1YBL049W 417 nt3.46□□□□□ -1.86
RPH1P39956 YOR238WYOR238W 912 nt3.46□□□□□ -1.86
RPH1P39956 CIN2YPL241C 807 nt3.46□□□□□ -1.86
RPH1P39956 YBR137WYBR137W 540 nt3.46□□□□□ -1.86
RPH1P39956 SMC3YJL074C 3693 nt3.46□□□□□ -1.86
RPH1P39956 SYT1YPR095C 3681 nt3.46□□□□□ -1.86
RPH1P39956 RNR1YER070W 2667 nt3.46□□□□□ -1.86
RPH1P39956 BAR1YIL015W 1764 nt3.46□□□□□ -1.86
RPH1P39956 URA2YJL130C 6645 nt3.45□□□□□ -1.86
RPH1P39956 MRPL11YDL202W 750 nt3.45□□□□□ -1.86
RPH1P39956 PDS1YDR113C 1122 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 46.4 ms