Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 pRNA.5-201ENST00000612139 90 ntBASIC18.08■□□□□ 0.48
HIST1H1DP16402 pRNA.11-201ENST00000618423 90 ntBASIC18.08■□□□□ 0.48
HIST1H1DP16402 pRNA.13-201ENST00000619112 90 ntBASIC18.08■□□□□ 0.48
HIST1H1DP16402 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H1DP16402 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H1DP16402 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HIST1H1DP16402 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HIST1H1DP16402 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H1DP16402 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H1DP16402 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.08■□□□□ 0.48
HIST1H1DP16402 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H1DP16402 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HIST1H1DP16402 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.07■□□□□ 0.48
HIST1H1DP16402 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.07■□□□□ 0.48
HIST1H1DP16402 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
HIST1H1DP16402 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 AC006455.2-201ENST00000429931 906 ntBASIC18.07■□□□□ 0.48
HIST1H1DP16402 AC239859.2-201ENST00000444165 318 ntBASIC18.07■□□□□ 0.48
HIST1H1DP16402 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.07■□□□□ 0.48
HIST1H1DP16402 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H1DP16402 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 MIR6724-1-201ENST00000616420 92 ntBASIC18.06■□□□□ 0.48
HIST1H1DP16402 MIR6724-2-201ENST00000616483 92 ntBASIC18.06■□□□□ 0.48
HIST1H1DP16402 MIR6724-4-201ENST00000617390 92 ntBASIC18.06■□□□□ 0.48
HIST1H1DP16402 MIR6724-3-201ENST00000622482 92 ntBASIC18.06■□□□□ 0.48
HIST1H1DP16402 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H1DP16402 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H1DP16402 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 AC087239.1-201ENST00000622671 572 ntBASIC18.05■□□□□ 0.48
HIST1H1DP16402 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HIST1H1DP16402 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H1DP16402 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H1DP16402 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HIST1H1DP16402 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
HIST1H1DP16402 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST1H1DP16402 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST1H1DP16402 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H1DP16402 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H1DP16402 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.03■□□□□ 0.48
HIST1H1DP16402 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H1DP16402 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.03■□□□□ 0.48
HIST1H1DP16402 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H1DP16402 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H1DP16402 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.03■□□□□ 0.48
HIST1H1DP16402 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H1DP16402 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIST1H1DP16402 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms