Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.25■□□□□ 0.67
RAF1P04049 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.25■□□□□ 0.67
RAF1P04049 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAF1P04049 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 FBXW4P1-201ENST00000426721 2239 ntBASIC19.24■□□□□ 0.67
RAF1P04049 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.24■□□□□ 0.67
RAF1P04049 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 MIR572-201ENST00000384983 95 ntBASIC19.24■□□□□ 0.67
RAF1P04049 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.24■□□□□ 0.67
RAF1P04049 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 AC012414.1-201ENST00000556676 535 ntBASIC19.24■□□□□ 0.67
RAF1P04049 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAF1P04049 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RAF1P04049 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAF1P04049 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RAF1P04049 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
RAF1P04049 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.23■□□□□ 0.67
RAF1P04049 MIR6084-201ENST00000622012 110 ntBASIC19.23■□□□□ 0.67
RAF1P04049 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAF1P04049 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAF1P04049 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
RAF1P04049 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
RAF1P04049 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.22■□□□□ 0.67
RAF1P04049 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
RAF1P04049 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAF1P04049 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.21■□□□□ 0.67
RAF1P04049 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.21■□□□□ 0.67
RAF1P04049 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RAF1P04049 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.21■□□□□ 0.67
RAF1P04049 CCDC92B-201ENST00000575506 885 ntBASIC19.21■□□□□ 0.67
RAF1P04049 NTF6G-201ENST00000591094 616 ntBASIC19.21■□□□□ 0.67
RAF1P04049 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAF1P04049 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.21■□□□□ 0.67
RAF1P04049 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAF1P04049 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.2■□□□□ 0.66
RAF1P04049 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAF1P04049 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.2■□□□□ 0.66
RAF1P04049 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.2■□□□□ 0.66
RAF1P04049 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAF1P04049 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAF1P04049 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAF1P04049 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.2■□□□□ 0.66
RAF1P04049 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAF1P04049 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAF1P04049 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms