Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.34■□□□□ 0.37
Capns1O88456 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capns1O88456 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.33■□□□□ 0.37
Capns1O88456 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.33■□□□□ 0.37
Capns1O88456 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Capns1O88456 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.33■□□□□ 0.36
Capns1O88456 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.33■□□□□ 0.36
Capns1O88456 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.36
Capns1O88456 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.33■□□□□ 0.36
Capns1O88456 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Capns1O88456 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Capns1O88456 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.32■□□□□ 0.36
Capns1O88456 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.32■□□□□ 0.36
Capns1O88456 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.32■□□□□ 0.36
Capns1O88456 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capns1O88456 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Capns1O88456 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capns1O88456 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Capns1O88456 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Capns1O88456 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Capns1O88456 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Capns1O88456 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.3■□□□□ 0.36
Capns1O88456 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Capns1O88456 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capns1O88456 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.29■□□□□ 0.36
Capns1O88456 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.29■□□□□ 0.36
Capns1O88456 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capns1O88456 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.28■□□□□ 0.36
Capns1O88456 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.28■□□□□ 0.36
Capns1O88456 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Capns1O88456 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Capns1O88456 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.28■□□□□ 0.36
Capns1O88456 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms