Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Spcs1-204ENSMUST00000226782 949 ntBASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.85□□□□□ -0.35
Trav9n-4A0A075B631 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav9n-4A0A075B631 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9n-4A0A075B631 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9n-4A0A075B631 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9n-4A0A075B631 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9n-4A0A075B631 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trav9n-4A0A075B631 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9n-4A0A075B631 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9n-4A0A075B631 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms