Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cldn3Q9Z0G9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn3Q9Z0G9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn3Q9Z0G9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn3Q9Z0G9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn3Q9Z0G9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn3Q9Z0G9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn3Q9Z0G9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn3Q9Z0G9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn3Q9Z0G9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn3Q9Z0G9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms