Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d3cQ9QZS8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.39■□□□□ 0.53
Sh2d3cQ9QZS8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh2d3cQ9QZS8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d3cQ9QZS8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d3cQ9QZS8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d3cQ9QZS8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Fst-202ENSMUST00000223640 2612 ntBASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d3cQ9QZS8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d3cQ9QZS8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sh2d3cQ9QZS8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d3cQ9QZS8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d3cQ9QZS8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d3cQ9QZS8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh2d3cQ9QZS8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d3cQ9QZS8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d3cQ9QZS8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d3cQ9QZS8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms