Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 TSPY26P-201ENST00000476365 1326 ntBASIC27.01■■□□□ 1.91
CHMP4BQ9H444 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHMP4BQ9H444 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC27■■□□□ 1.91
CHMP4BQ9H444 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27■■□□□ 1.91
CHMP4BQ9H444 AF213884.3-201ENST00000563833 479 ntBASIC27■■□□□ 1.91
CHMP4BQ9H444 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHMP4BQ9H444 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
CHMP4BQ9H444 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 AL136967.2-201ENST00000623968 743 ntBASIC26.99■■□□□ 1.91
CHMP4BQ9H444 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.99■■□□□ 1.91
CHMP4BQ9H444 AC009237.3-201ENST00000393279 1427 ntBASIC26.99■■□□□ 1.91
CHMP4BQ9H444 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 MIR572-201ENST00000384983 95 ntBASIC26.98■■□□□ 1.91
CHMP4BQ9H444 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 AL031432.3-201ENST00000607698 485 ntBASIC26.98■■□□□ 1.91
CHMP4BQ9H444 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.98■■□□□ 1.91
CHMP4BQ9H444 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 AC105233.4-201ENST00000642045 216 ntBASIC26.97■■□□□ 1.91
CHMP4BQ9H444 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHMP4BQ9H444 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 SUDS3P1-201ENST00000505831 966 ntBASIC26.96■■□□□ 1.91
CHMP4BQ9H444 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHMP4BQ9H444 AP006587.3-201ENST00000525742 1516 ntBASIC26.95■■□□□ 1.91
CHMP4BQ9H444 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.95■■□□□ 1.91
CHMP4BQ9H444 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CHMP4BQ9H444 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.95■■□□□ 1.9
CHMP4BQ9H444 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CHMP4BQ9H444 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 AC026471.6-201ENST00000622954 1905 ntBASIC26.93■■□□□ 1.9
CHMP4BQ9H444 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CHMP4BQ9H444 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms