Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM2Q9C040 AL034346.1-201ENST00000568244 1277 ntBASIC19.66■□□□□ 0.74
TRIM2Q9C040 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM2Q9C040 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM2Q9C040 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM2Q9C040 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TRIM2Q9C040 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM2Q9C040 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM2Q9C040 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM2Q9C040 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM2Q9C040 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TRIM2Q9C040 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM2Q9C040 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM2Q9C040 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
TRIM2Q9C040 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM2Q9C040 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM2Q9C040 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 AC007375.3-201ENST00000600936 2314 ntBASIC19.63■□□□□ 0.73
TRIM2Q9C040 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM2Q9C040 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM2Q9C040 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM2Q9C040 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM2Q9C040 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 AC142381.2-201ENST00000566120 298 ntBASIC19.63■□□□□ 0.73
TRIM2Q9C040 AL031432.3-201ENST00000607698 485 ntBASIC19.63■□□□□ 0.73
TRIM2Q9C040 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM2Q9C040 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM2Q9C040 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 EDA-201ENST00000338901 1233 ntBASIC19.62■□□□□ 0.73
TRIM2Q9C040 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 BX842568.3-201ENST00000418104 571 ntBASIC19.62■□□□□ 0.73
TRIM2Q9C040 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM2Q9C040 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM2Q9C040 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM2Q9C040 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM2Q9C040 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 AC104564.3-201ENST00000582367 638 ntBASIC19.61■□□□□ 0.73
TRIM2Q9C040 MIR4767-201ENST00000582827 78 ntBASIC19.61■□□□□ 0.73
TRIM2Q9C040 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
TRIM2Q9C040 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM2Q9C040 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM2Q9C040 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM2Q9C040 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM2Q9C040 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 SUDS3P1-201ENST00000505831 966 ntBASIC19.6■□□□□ 0.73
TRIM2Q9C040 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM2Q9C040 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms